AT1G16210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5546352..5547447 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26827.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.92 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.24 | ||||||||||||||||||||||||||||
| Length | 234 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPKKMGLNSK AEVAKSRKNA AEAEQKDRQT REKEEQYWRE AEGPKSKAVK KREEEAEKKA ETAAKKLEAK RLAEQEEKEL EKALKKPDKK ANRVTVPVPK 101: VTEAELIRRR EEDQVALAKK AEDSKKKQTR MAGEDEYEKM VLVTNTNRDD SLIEAHTVDE ALARITVSDN LPVDRHPEKR LKASFKAYEE VELPRLKSEK 201: PGLTHTQYKD LIWKMWKKSP DNPLNQAAAA AANE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)