AT1G10570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cysteine proteinases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
OVERLY TOLERANT TO SALT 2 (OTS2); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 1265 Blast hits to 1250 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 251; Plants - 239; Viruses - 3; Other Eukaryotes - 156 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3487639..3491102 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66082.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.74 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 571 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKRQRAIELD RVKKTMLNID WDDALGDEEV PELEIIATDK IPPREPTLSG YEPAVSVRSL RDNELDDHLK RQRSLLTRLG DKLADKGEKI RNRIGELEYE 101: KQRRMFQQRT KMQDADNGCQ ILEKPKSSDV FMRASTASKD TSGQGTSGSK DVSRSTFAAH FSDNLKMGPQ PVKLVNDKLQ DLGRGSWISK ANRDSIIEKN 201: NVWRSLPRLS KCKVSLKNFY SESKDPKGDR RPNEAYGKGK PNESSPYLLV DDDDGDDDKV IGYETPRHWS LKASPLQSSS CRKKSDDKVI NLDEDEPLSP 301: MVVEEACELP EGLPEDIYYP SSDQSDGRDL VQVSLKDLKC LSPGEYLTSP VINFYIRYVQ HHVFSADKTA ANCHFFNTFF YKKLTEAVSY KGNDRDAYFV 401: KFRRWWKGFD LFCKSYIFIP IHEDLHWSLV IICIPDKEDE SGLTIIHLDS LGLHPRNLIF NNVKRFLREE WNYLNQDAPL DLPISAKVWR DLPNMINEAE 501: VQVPQQKNDF DCGLFLLFFI RRFIEEAPQR LTLQDLKMIH KKWFKPEEAS ALRIKIWNIL VDLFRKGNQT D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)