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AT1G09980.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Putative serine esterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative serine esterase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G58350.2); Has 480 Blast hits to 383 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 283; Fungi - 2; Plants - 87; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQFKeggNOG:KOG2205EMBL:AK176303EMBL:AY080657EMBL:AY123021EMBL:CP002684EnsemblPlants:AT1G09980
EnsemblPlants:AT1G09980.1entrez:837532ESTHER:arath-At1g09980ExpressionAtlas:Q8RXV4Gene3D:3.40.50.1820GeneID:837532Gramene:AT1G09980.1
hmmpanther:PTHR12482hmmpanther:PTHR12482:SF5HOGENOM:HOG000243984InterPro:IPR007751InterPro:IPR022122InterPro:IPR029058OMA:EWSIWTV
Pfam:PF05057Pfam:PF12394PhylomeDB:Q8RXV4Proteomes:UP000006548RefSeq:NP_172469.2STRING:3702.AT1G09980.1SUPFAM:SSF53474
TAIR:AT1G09980UniGene:At.43993UniProt:Q8RXV4
Coordinates (TAIR10) chr1:-:3256541..3260866
Molecular Weight (calculated) 92072.30 Da
IEP (calculated) 9.10
GRAVY (calculated) -0.35
Length 802 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRRLGWLIG LSQRSRQTKS IDAEPYVARV KPVLMIDTVQ EIAIYIHRFH NLDLFQQGWY QIKISMRWED GDNNSCGIPS RVVQYEALDS TSNDSYGVWK
101: IDDKDSSFLT QPFRIKYARQ DVRLCMMVSF TMPLERYEGS ATSAVILKFE LLYSPIMEDI PVTHSDACAA AVHEFRIPPK ALSGVHSYCP VHFDTFHAVL
201: IDVSVHVSVM KSAAYKRPAI LSSDASNGKN LTSGNIQSSK KAFTQIASAD KKLVSFVKAL LGARDTLLEE MQRLSKAVGQ TVDLSEFVSS MDNALLSDSG
301: STGKSVEVEG SGQGKLQNNL EKLNGPFDLA SDDWLHNFSK EHLSRTFHLL GTQLHYLWNT FLTLHRDNYT KILEYLRDIW TKDRRAEWSI WMVYSKVEMP
401: HHFISGMEDI SNHSSHKRVS TGLKLNDPAQ VASTRAELHR RSIAQMRINN RAIQDMHIFG DPMRVPIVII ERVWNAPRRT FSDNSYMRHV DRIDSSLLNG
501: HDDESGTKKH INPQHTGREL KIVVFVHGFQ GHHLDLRLIR NQWLLIDPKI EFLMSEANEE RTHGDFREMG QRLAQEVVSF FKRKKDKHAR YGRLKNIKLS
601: FVGHSIGNVI IRAAIADSLM DPYRKYFHTY ISLSGPHLGY LYSSNSLFNS GLWLLKKLKS TQVIHQLTLT DDPDLQNTFF YKLCKQKTLC SFKNIILLSS
701: PQDGYVPYHS ARIESCQPAS FDNSKRGVAF LEMLNNCMDQ IRGPSPETPH HQRVFMRCDV NFDTTLYGRN LNSFIGRAAH IEFLESDVFA RFIMWSFQDL
801: FR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)