AT1G02660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.921 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1); Has 747 Blast hits to 737 proteins in 148 species: Archae - 0; Bacteria - 27; Metazoa - 209; Fungi - 146; Plants - 175; Viruses - 15; Other Eukaryotes - 175 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:572187..574746 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78350.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.96 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||
| Length | 713 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSLCLNSGL HGVIPAITAV GNGGCGGVVE VRATASAPSQ KRGPFGFSFK YPLTPFWSRG GGGGIASRRR SGLCLDDAVL VDSGDSRKPI AEETAVEMDT 101: ERRNGSWVLK ILDVQSTWKH EEEEDDDEVE DEDGDEDEEV ELDDAVVSED DGGCDVCSVL EDDGNEANKF QLDRESFSKL LRRVTLPESK LYAQLSYLGN 201: LAYSISKIKP ANLSKYYGLR FVTSSAEKTE SALKAENGEV SGETKPIVEA EEEVEEEEKN KSRKISASAA YEIVASAASY LHSRTNNILP FNSSSKAENS 301: DKHDVNLTNA ESSSDVAYSV TSVVAAEEDV KQAVADDLKS TISSPCDWFI CDDDQSHTRF VVIQGSESLA SWQANLLFEP IEFEGLGAIV HRGIYEAAKG 401: MYEQMLPEVK AHIKTHGTSA KFRFTGHSLG GSLSLLLNLM LLVRGEVPAS SLLPVITYGA PFVLCGGDRL LKKLGLPKSH VQAIVMHRDI VPRAFSCNYP 501: YHVAELLKAV NGNFRSHPCL NKQSMLYSPM GELLILQPDE TFSPGHELLP SGNGLYLLTS DFESPDIEDS DEERLRAAQT VFLNTPHPLD ILSDRSAYGS 601: SGTIQRDHDM NSYLKAVRSV IRKEVNQIRR AKREHRRSLW WPILVARESG SSGIAVSNGQ INGQDFSGMM QTGRKSLQRF SRLVASQHMP LIVVMLFPVK 701: LLFLGAFNVF SFR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)