AT1G02020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nitroreductase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:352842..354845 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71369.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.65 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||
| Length | 642 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNPRQRKGE AMMNPTISWR FASSTSLLSI PRTPKSAFIF AMTFSSSSSS SSSSSSVENP NKDDSSSSLE LVLKYHNQTK HSLNGYARGP RGLDWANQPN 101: PFRRYLSAPL LPLQHPNHDI DDDSDSPLYS TLFDSLPPPK PISLPTISHL FYHSLALSAW KTTGSSTWPL RVNPSSGNLH PTEAYLIAPP IPSLSQSAFV 201: SHYAPKEHSL EVRAHIPSSF FPNFFPENSF LIGISSIFWR EAWKYGERAF RYCNHDVGHA IAALSIAAAD LGWDLKLLDA FGADDLKRLM GLPEFQLPEG 301: KGKAELPEIE FEHPDCLLLV FPNGTSREHL NLDYLAISSA LRDFPSLEWT GNPNTLSKEH LCWDIIYRTA KAVEKPPLIY STSSSSIDVA SFTSSRALFS 401: HSSYNKLTVR QVVRTRRSAV DMDAVTCIDM SSFYQMLMHC LPSTGESQKE QLALPFRALP WDTAEVHLAL FVHRVSGLPK GLYLLVRNED HLSDLKTATR 501: PEFEWTKPDG CPDNLPLYKL AEGDCQRLAK GLSCHQDIAG DGCFSLGMIA RFEPALREKG SWMYPRLFWE TGVVGQVLYL EAHAMGISAT GIGCYFDDPV 601: HEVLGINDSS FQSLYHFTVG GPVVDKRIMT LPAYPGPTTT VA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)