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AT5G66650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF607)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT2G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:22039eggNOG:ENOG410Y3YUeggNOG:KOG2966EMBL:AB018119
EMBL:AY042903EMBL:BT020326EMBL:CP002688EnsemblPlants:AT5G66650
EnsemblPlants:AT5G66650.1entrez:836797GeneID:836797Genevisible:Q9LVR5
GO:GO:0005262GO:GO:0005743GO:GO:0016021Gramene:AT5G66650.1
hmmpanther:PTHR13462hmmpanther:PTHR13462:SF4HOGENOM:HOG000239883InParanoid:Q9LVR5
InterPro:IPR006769KEGG:ath:AT5G66650OMA:REIGKNWPaxDb:Q9LVR5
Pfam:PF04678Pfam:Q9LVR5PhylomeDB:Q9LVR5PRIDE:Q9LVR5
PRO:PR:Q9LVR5Proteomes:UP000006548RefSeq:NP_201466.1STRING:3702.AT5G66650.1
TAIR:AT5G66650TMHMM:TMhelixUniGene:At.8661UniProt:Q9LVR5
Coordinates (TAIR10) chr5:-:26603204..26604257
Molecular Weight (calculated) 36767.80 Da
IEP (calculated) 9.84
GRAVY (calculated) -0.37
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSKKSLVQS LFNISKTYSR ISGLTRMRPT KSGGIPPDAG DSGIRRRFLH KRAFFSPEIV PKGGNLMEKL RELTLSNNNR IRLDEMLPPP SPKKSSPEFF
101: PAVTVEDVKK LMRAAEMELV KSKLREIGKN WVPYSEFVRV CGEYSSDPEQ GNRVANMLDE AGNVIVLGKL VCLKPEELTS AMAGLIPTLE PSLDAETRQE
201: FEQLEIIKSD IDKRADDLVR KELWAGLGLI MAQTVGFFRL TFWELSWDVM EPICFYVTST YFMAGYAFFL RTSKEPSFEG FYKSRFETKQ KRLIKMLDFD
301: IDRFTKLQKM HRPNLTKSGR C
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)