AT5G66650.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : Protein of unknown function (DUF607) | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT2G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr5:-:26603204..26604257 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 36767.80 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.84 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||
Length | 321 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSSKKSLVQS LFNISKTYSR ISGLTRMRPT KSGGIPPDAG DSGIRRRFLH KRAFFSPEIV PKGGNLMEKL RELTLSNNNR IRLDEMLPPP SPKKSSPEFF 101: PAVTVEDVKK LMRAAEMELV KSKLREIGKN WVPYSEFVRV CGEYSSDPEQ GNRVANMLDE AGNVIVLGKL VCLKPEELTS AMAGLIPTLE PSLDAETRQE 201: FEQLEIIKSD IDKRADDLVR KELWAGLGLI MAQTVGFFRL TFWELSWDVM EPICFYVTST YFMAGYAFFL RTSKEPSFEG FYKSRFETKQ KRLIKMLDFD 301: IDRFTKLQKM HRPNLTKSGR C |
||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)