AT5G66200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : armadillo repeat only 2 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:26453648..26455603 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70817.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.33 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||
| Length | 651 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADIVKQILA KPIQLSDQVV KAADEASSFK QECGELKAKT EKLAGLLRQA ARASNDLYER PTRRIIDDTE QMLEKALSLV LKCRANGLMK RVFTIIPAAA 101: FRKMSGQLEN SIGDVSWLLR VSAPAEDRGD AGYLGLPPIA ANEPILCLIW EQIAILYTGS LEDRSDAAAS LVSLARDNDR YTKLIIEEGG VVPLLKLLKE 201: GKPEGQENAA RALGLLGRDP ESVEHMIHGG ACSVFGKVLK EGPMKVQAVV AWATSELVSN HPKCQDVFAQ HNAIRLLVGH LAFETVQEHS KYAIATNNKA 301: TSIHHAVALA KENPNSTSAT ALPKGLDEDQ SSIPHPTGKQ MPNQMHNVVV NTMAVRANPP RKSTSNGVSQ SNGVKQPSSV QQHQNSTSSA SKTRELEDSA 401: TKCQIKAMAA RALWKLAKGN STICKSITES RALLCFAVLI EKGDEEVRYN SAMALMEITA VAEQDADLRR SAFKPNSPAC KAVVDQVLRI IEIADSELLI 501: PCIRTIGNLA RTFRATETRM IGPLVKLLDE REPEVTGEAA AALTKFACTA NYLHKDHSRG IIEAGGGKHL VQLAYFGEGG VQIPALELLC YIALNVPDSE 601: QLAKDEVLAV LEWASKQSWV TQLESLEALL QEAKRGLDLY QQRGSRGYNF N |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)