AT5G65830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 57 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 57 (RLP57); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 44 (TAIR:AT3G49750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:26342396..26343235 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30880.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.59 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||||||
| Length | 279 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPVNHRFTFS YRLLFLIFLL SFETAQRLVT GDPNDEACLT NLRQSLEDPA NNLRNWTKSF FINPCSGFSS YLHGVICNNG RIYKLSLTNL SLRGSISPFL 101: SNCTNLQSLD LSSNQISGEI PPQLQFFVNL AVLNLSSNRL SGQISPQIAL CAYLNVIDLH DNQLSGQIPF QFGLLARLTA FDVSNNKLSG QIPSNLAMRN 201: GNLPRFNASS FIGNKKLFGY PLEEMKNKGL SIMAIVGIGL GSGIASLVIS FTGVCIWLKI TEKKMEEEEG KISHSMPVY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)