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AT5G63940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.888
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63940-MONOMEReggNOG:COG0515eggNOG:ENOG410IEG5EMBL:AB019227
EMBL:AY093058EMBL:BT008790EMBL:CP002688EnsemblPlants:AT5G63940
EnsemblPlants:AT5G63940.1entrez:836515Gene3D:2.60.120.200Gene3D:3.40.50.620
GeneID:836515GO:GO:0004674GO:GO:0005524GO:GO:0006950
GO:GO:0016787Gramene:AT5G63940.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF35
HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR006016InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013320InterPro:IPR014729InterPro:IPR017441
KEGG:ath:AT5G63940OMA:CARNLAKPfam:PF00069Pfam:PF00582
Pfscan:PS50011PhylomeDB:Q9LVN9PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_201199.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9LVN9STRING:3702.AT5G63940.1
SUPFAM:SSF52402SUPFAM:SSF56112TAIR:AT5G63940UniGene:At.9551
UniProt:Q9LVN9
Coordinates (TAIR10) chr5:+:25588254..25591229
Molecular Weight (calculated) 77360.60 Da
IEP (calculated) 5.66
GRAVY (calculated) -0.22
Length 705 amino acids
Sequence (TAIR10)
(BLAST)
001: MKPTGEGGGE VAGAVAEGSA LLIVGVKPDE WSREVLTWSL VNVARPGDRI VALHVLDYSL EGSTSLISLV RNFDTMLGVY ESFCNLKQVD LKLKVFRGKS
101: ARKVLVQEVK SCGATSLIVG SSRKHHTIRS SASLAKYCAR NLAKDVSVFA VKSGKIMFRR VPNTNGADGP QMNIPSLVCG SPDIAIEAAK IGNSFSPART
201: SSRWTRTSRS SSLQSPDSLG VDNLLALVPV QTNETDSGSL ESGPGWHFLR GLYGNNRKSW TKVSAKKAVL QWVSRLRGRH SETVIYLDRK RSDSGCDEDC
301: SSSIDGEDVS ISRFGSELMQ SPLSPFIGSN NIPEELEGLH EKYSSTCRLF TYEEVLSITS NFASENLVGE GGNSYVYRGD LPDGRELAVK ILKPCLDVLK
401: EFILEIEVIT SVHHKNIVSL FGFCFENNNL MLVYDYLPRG SLEENLHGNR KDAKKFGWME RYKVAVGVAE ALDYLHNTHD PEVIHRDVKS SNVLLADDFE
501: PQLSDFGFAS LASSTSQHVA GGDIAGTFGY LAPEYFMHGK VTDKIDVYAF GVVLLELISG RKPICVDQSK GQESLVLWAN PILDSGKFAQ LLDPSLENDN
601: SNDLIEKLLL AATLCIKRTP HDRPQIGLVL KILQGEEEAT EWGKQQVRAS EDVSAYLTNI ESHINLALLD LEDDAASDSS PEASSISVEE YLKGRWSRTA
701: SFNFN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)