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AT5G62840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 111 Blast hits to 111 proteins in 37 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ2KeggNOG:ENOG4110UK9EMBL:AB009053EMBL:AY088319
EMBL:CP002688EnsemblPlants:AT5G62840EnsemblPlants:AT5G62840.1entrez:836405
Gene3D:3.40.50.1240GeneID:836405Gramene:AT5G62840.1hmmpanther:PTHR23029
hmmpanther:PTHR23029:SF45HOGENOM:HOG000030654InterPro:IPR013078InterPro:IPR029033
KEGG:ath:AT5G62840OMA:PDSDNLTPfam:PF00300PhylomeDB:Q9FM11
Proteomes:UP000006548RefSeq:NP_201090.1STRING:3702.AT5G62840.1SUPFAM:SSF53254
TAIR:AT5G62840UniGene:At.29029UniProt:Q9FM11
Coordinates (TAIR10) chr5:-:25228296..25229672
Molecular Weight (calculated) 32360.70 Da
IEP (calculated) 7.86
GRAVY (calculated) -0.16
Length 297 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSSSPAVTT ASHLHPPPSP ETYQIPLNLL SSPHITRRDL FKTLSVCIAT PSLSVSIAAP ANARGLFQMP PLRLSNRYYL VRAGESDYES LGIINTNPVA
101: KTSVDSGLSE KGKKQTLRAA LQLKAMGACD RNCWLWPSIT QRAYQAAEII AAINGISRSY IVPEYSFLDA RGLGAYEGKK LESISEVYAL DSISMKTKPP
201: PISDGTPNES VSDVFVRVTQ LMSILETQYS EDTIVIVSPD SDNLSVLQAG IQGLDLRRHS ELYFGPGEVR LLDANSIPVY KQPASAVYKC KKPPNCD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)