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AT5G58660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.823
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G47190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G58660-MONOMEReggNOG:COG3491eggNOG:KOG0143EMBL:AB020755
EMBL:CP002688EnsemblPlants:AT5G58660EnsemblPlants:AT5G58660.1entrez:835980
Gene3D:2.60.120.330GeneID:835980GO:GO:0005506GO:GO:0016491
Gramene:AT5G58660.1gramene_pathway:1.14.11.-gramene_pathway:1.14.11.13gramene_pathway:PWY-102
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF206HOGENOM:HOG000276735InterPro:IPR002283
InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT5G58660
OMA:MEPHTDSPfam:PF03171Pfam:PF14226Pfscan:PS51471
PhylomeDB:Q9LUZ1PRINTS:PR00682PROSITE:PS51471Proteomes:UP000006548
RefSeq:NP_200674.1SMR:Q9LUZ1STRING:3702.AT5G58660.1SUPFAM:SSF51197
TAIR:AT5G58660UniGene:At.7870UniProt:Q9LUZ1
Coordinates (TAIR10) chr5:+:23701509..23703802
Molecular Weight (calculated) 39670.30 Da
IEP (calculated) 5.55
GRAVY (calculated) -0.34
Length 352 amino acids
Sequence (TAIR10)
(BLAST)
001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)