AT5G57035.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.826 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : U-box domain-containing protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:23080743..23083819 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88880.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.67 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 789 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVVMTNKFFE LIGGAPSYSS VSVAVKGSVG DAVGGTASRR ALRWTIENFL PKIDRLVLVH VMPTVTTIPS PSGSKIPIEE LDESVVSMYK RDLRKEFEQV 101: FVPFKRICKS NKVETLLLEH HDPAKALLKY MSDTDVECLV IGSCSSNFLT RKKGQEMPLT VLGEAPETCE IYVVCKDRIL TKSTNQFTAD SSSSFRIPEG 201: AEAYTESFSR TRSDKTGLSA SSITSSGRMR IGRPGSLPHS HPTSRVYSDA QSSSTDIVLV DDEHCRSILR HSTVSTSKIQ MDPRPHLKTP KSGVRAEVEQ 301: LRKEVQTTLS MYKQACEELV HKQTQVQSLS SECIKETERV ITALEKEEMR RKAAAEEKEK HLKAVKEVEE AKSMLAKEFC ERQLAELDAL KQSIEKQKVI 401: EQLFLRDGRY RKYTKEEIAA ATDNFSSRKI IGEGGYGKVY KCSLDHTPVA LKVLKPDSVE KKEEFLKEIS VLSQLRHPHV VLLLGACPEN GCLVYEYMEN 501: GSLDCHISPK KGKPSLSWFI RFRIIYETAC GLAFLHNSKP EPIVHRDLKP GNILLDRNFV SKIGDVGLAK LMSDEAPDSV TVYRNSIIAG TLYYMDPEYQ 601: RTGTIRPKSD LYAFGIIILQ LLTARHPNGL LFCVEDAVKR GCFEDMLDGS VKDWPIAEAK ELARIAIRCS QLKCRDRPDL STQVLPALKR ILESANSRLK 701: TEQANARAPT HYYCPILKEI MEDPQIAADG FTYERKAIKE WIQKHQDVSP VTKHRLKHSD LTPNHTLRSA IREWRSRSRL DLSTTLGSY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)