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AT5G57015.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.763
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : casein kinase I-like 12
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
casein kinase I-like 12 (ckl12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G57015-MONOMEReggNOG:ENOG410XPGPeggNOG:KOG1164EMBL:AK118919
EMBL:AY070458EMBL:AY091321EMBL:AY943855EMBL:CP002688
EnsemblPlants:AT5G57015EnsemblPlants:AT5G57015.1entrez:835804GeneID:835804
GO:GO:0004674GO:GO:0005524GO:GO:0005737GO:GO:0016055
GO:GO:0018105Gramene:AT5G57015.1hmmpanther:PTHR11909hmmpanther:PTHR11909:SF154
HOGENOM:HOG000182055InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT5G57015OMA:DERFHHHPfam:PF00069
Pfscan:PS50011PhylomeDB:Q8VYK9PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_680447.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q8VYK9STRING:3702.AT5G57015.1
SUPFAM:SSF56112TAIR:AT5G57015tair10-symbols:ckl12UniGene:At.28346
UniProt:Q8VYK9
Coordinates (TAIR10) chr5:+:23071508..23074577
Molecular Weight (calculated) 49403.90 Da
IEP (calculated) 9.95
GRAVY (calculated) -0.62
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPRVGNKYR LGRKIGSGSF GEIYLGTHIQ TNEEVAIKLE NVKTKHPQLL YESKLYRILQ GGTGVPNIKW FGVEGDYNTL VMDLLGPSLE DLFNFCSRKL
101: SLKSVLMLAD QMINRVEYFH SKSFLHRDLK PDNFLMGLGR RANQVHIIDF GLAKKYRDNT THQHIPYREN KNLTGTARYA SMNTHLGIEQ SRRDDLESLG
201: YILMYFLKGS LPWQGLKAGT KKQKYERISE KKVSTSIESL CRGYPSEFAS YFHYCRSLRF DDKPDYGYLK RIFRDLFIRE GFQFDYVFDW TILKYQQSQL
301: TAPPSRGLVS PAVGTSAGLP PGLTSIDRYG GEEEGGRPPM DSSRRRMSGA LENSGNLSSR GPMMPSSSLF AQSAGSSRRV TSEELQRCRT GAGLRNSPVV
401: TTPEGKRSSS TRKHYDSAIK GIETLQVSDE RFHHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)