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AT5G55130.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.772
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : co-factor for nitrate, reductase and xanthine dehydrogenase 5
Curator
Summary (TAIR10)
putative molybdopterin synthase sulphurylase (cnx5)
Computational
Description (TAIR10)
co-factor for nitrate, reductase and xanthine dehydrogenase 5 (CNX5); FUNCTIONS IN: Mo-molybdopterin cofactor sulfurase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040), MoeZ/MoeB (InterPro:IPR007901); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:2.7.7.80EC:2.8.1.11eggNOG:COG0607EMBL:CP002688
EnsemblPlants:AT5G55130EnsemblPlants:AT5G55130.1entrez:835604Gene3D:3.40.250.10
Genevisible:Q9ZNW0GO:GO:0004792GO:GO:0005524GO:GO:0008265
HAMAP:MF_03049hmmpanther:PTHR10953hmmpanther:PTHR10953:SF160InterPro:IPR028885
ncoils:CoilPaxDb:Q9ZNW0Pfam:PF00581Pfam:PF00899
Pfam:Q9ZNW0Pfscan:PS50206Proteomes:UP000006548SMR:Q9ZNW0
STRING:3702.AT5G55130.1SUPFAM:SSF69572tair10-symbols:CNX5tair10-symbols:SIR1
UniGene:At.24643UniProt:Q9ZNW0
Coordinates (TAIR10) chr5:-:22373374..22376028
Molecular Weight (calculated) 50576.50 Da
IEP (calculated) 5.63
GRAVY (calculated) -0.12
Length 464 amino acids
Sequence (TAIR10)
(BLAST)
001: MMSNGGDSSE IVRELEELKL KKAEIEHRIS TLEAKLQDTA AVELYDAVSN GDSYLTAPEL EHGLSPDQIY RYSRQLLLPS FAVEGQSNLL KSSVLVIGAG
101: GLGSPALLYL AACGVGQLGI IDHDVVELNN MHRQIIHTEA FIGHPKVKSA AAACRSINST IKVDEYVEAL RTSNALEILS QYDIIVDATD NPPSRYMISD
201: CCVLLGKPLV SGAALGMEGQ LTVYNHNGGP CYRCLFPTPP PTSACQRCSD SGVLGVVPGV IGCLQALETI KLASLVGEPL SERMLLFDAL SARMRIVKIR
301: GRSSQCTVCG DNSSFNKQTF KDFDYEDFTQ FPLFAGPLNL LPAESRISSK EFKEILQKKE QHVLLDVRPS HHYKIVSLPD SLNIPLANLE TRLNELTSAL
401: KEKGNGHANT ESCTNPSVFV VCRRGNDSQR AVQYLRESGF DSAKDIIGGL EAWAANVNPN FPTY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)