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AT5G19180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : E1 C-terminal related 1
Curator
Summary (TAIR10)
Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.
Computational
Description (TAIR10)
E1 C-terminal related 1 (ECR1); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), E2 binding (InterPro:IPR014929); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:6.3.2.-eggNOG:COG0476eggNOG:KOG2015EMBL:AC069326
EMBL:AF051135EMBL:AK226388EMBL:AY050426EMBL:AY120692
EMBL:CP002688EnsemblPlants:AT5G19180EnsemblPlants:AT5G19180.1entrez:832038
Gene3D:1.10.10.520Gene3D:3.10.20.260Gene3D:3.40.50.720GeneID:832038
Genevisible:O65041GO:GO:0005524GO:GO:0005634GO:GO:0005829
GO:GO:0016881GO:GO:0019781GO:GO:0045116GO:GO:0046982
Gramene:AT5G19180.1hmmpanther:PTHR10953hmmpanther:PTHR10953:SF6HOGENOM:HOG000166793
InParanoid:O65041InterPro:IPR000594InterPro:IPR014929InterPro:IPR016040
InterPro:IPR023318InterPro:IPR030468InterPro:IPR033127KEGG:00220+6.3.2.-
KEGG:00261+6.3.2.-KEGG:00380+6.3.2.-KEGG:ath:AT5G19180KO:K10686
OMA:QFNLVICPANTHER:PTHR10953:SF6PaxDb:O65041Pfam:O65041
Pfam:PF00899Pfam:PF08825PhylomeDB:O65041PIR:T52253
PRIDE:O65041PRO:PR:O65041PROSITE:PS00865ProteinModelPortal:O65041
Proteomes:UP000006548RefSeq:NP_568370.1scanprosite:PS00865SMART:SM01181
SMR:O65041STRING:3702.AT5G19180.1SUPFAM:SSF69572TAIR:AT5G19180
tair10-symbols:ECR1UniGene:At.21297UniPathway:UPA00885UniProt:O65041
Coordinates (TAIR10) chr5:+:6453375..6455750
Molecular Weight (calculated) 50544.10 Da
IEP (calculated) 5.38
GRAVY (calculated) -0.13
Length 454 amino acids
Sequence (TAIR10)
(BLAST)
001: MADLDVPPQV PQSKTRDLDK LLLRHGNLVD PGFVPGPGLR DDIRDYVRIL VIGAGGLGCE LLKDLALSGF RNLEVIDMDR IEVTNLNRQF LFRIEDVGKP
101: KAEVAAKRVM ERVSGVEIVP HFSRIEDKEI EFYNDFNIIA LGLDSIEARK YINGVACGFL EYNEDDTPKR ETIKPMVDGG TEGFKGHARV ILPGVTPCFE
201: CTIYLFPPQV KFPLCTLAET PRNAAHCIEY AHLIQWETVH RGKTFDPDEP EHMKWVYDEA IRRAELFGIP GVTYSLTQGV VKNIIPAIAS TNAIISAACA
301: LETLKIVSAC SKTLVNYLTY NGGEGLYTEV TKFERDTECL VCGPGILIEL DTSVTLSKFI EMLEDHPKLL LSKASVKQGE NTLYMQAPPV LEEFHRPKLS
401: KPLYDLMGRV QKDTIHVFGQ RALKNNEKES CTTKVRVVFK GADGVADMDT AIGA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)