AT5G51740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Peptidase family M48 family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 6369 Blast hits to 6329 proteins in 1292 species: Archae - 10; Bacteria - 4324; Metazoa - 65; Fungi - 153; Plants - 45; Viruses - 0; Other Eukaryotes - 1772 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:21017110..21018987 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49661.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.13 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||
| Length | 442 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSWYRRTKLV FDSLRRNINP KILPRSHVTS RINNPIGSSN PSAKFSSISS REVGLRSWTS LGRNTNRIAY NPFLSQPKRY YYVDRYQVRH FKPRGPGRWF 101: QNPRTVFTVV LVGSVGLITL IVGNTETIPY TKRTHFILLS KPMEKLLGET QFEQIKKTYQ GKILPATHPE SIRVRLIAKE VIDALQRGLS NERVWSDLGY 201: ASTESSLGGG SDKGVKEMEM AMSGEDTMTD MKWSKEDQVL DDQWIQKSRK KDSKAHAATS HLEGISWEVL VVNEPIVNAF CLPAGKIVVF TGLLNHFKSD 301: AEVATVIGHE VGHAVARHVA EGITKNLWFA ILQLVLYQFV MPDLVNTMSA LFLRLPFSRK MEIEADYIGL LLLASAGYDP RVAPTVYEKL GKLGGDALGD 401: YLSTHPSGKK RSKLLAQANV MEEALMIYRE VQAGRTGVEG FL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)