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AT5G48370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Thioesterase/thiol ester dehydrase-isomerase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioesterase/thiol ester dehydrase-isomerase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT2G30720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G48370-MONOMEReggNOG:ENOG410XSYMeggNOG:KOG2763EMBL:AK226948
EMBL:AP000372EMBL:BT015761EMBL:BT020202EMBL:CP002688
EnsemblPlants:AT5G48370EnsemblPlants:AT5G48370.1entrez:834890ExpressionAtlas:Q9LK77
Gene3D:3.10.129.10GeneID:834890GO:GO:0005777Gramene:AT5G48370.1
gramene_pathway:3.1.2.2gramene_pathway:PWY-5148hmmpanther:PTHR12655hmmpanther:PTHR12655:SF3
HOGENOM:HOG000264978IntAct:Q9LK77InterPro:IPR029069InterPro:IPR033120
OMA:ISWATAFPfscan:PS51770PhylomeDB:Q9LK77PROSITE:PS51770
Proteomes:UP000006548Reactome:R-ATH-75105RefSeq:NP_199648.1SMR:Q9LK77
STRING:3702.AT5G48370.1SUPFAM:SSF54637TAIR:AT5G48370UniGene:At.27602
UniProt:Q9LK77
Coordinates (TAIR10) chr5:-:19598666..19600512
Molecular Weight (calculated) 49438.30 Da
IEP (calculated) 7.55
GRAVY (calculated) -0.26
Length 438 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSPRPISVV STFASPSSTS DPTRKPLSLW PGMYHSPVTT ALWEARSKIF ESLLDPPKDA PPQSQLLTRT PSHSRTTIFY PFSTDFILRE QYRDPWNEVR
101: IGILLEDLDA LAGTISVKHC SDDDSTTRPL LLVTASVHKI VLKKPICVDI DLKIVASVIW VGRSSIEIQL EVMQSELKDV KASSDSVALT ANFIFVARDS
201: KTGKAAPINR LSPETEVEKL LFEEAEARNN LRKKKRGGDR REFDHGECKK LEAWLAEGRI FSDMPALADR NSILLKDTRL ENSLICQPQQ RNIHGRIFGG
301: FLMHRAFELA FSTAYTFAGL VPYFLEVDHV DFLRPVDVGD FLRFKSCVLY TQLDKQDCPL INIEVVAHVT SPEIRSSEVS NTFYFKFTVR PEAKARNNGF
401: KLRNVVPATE EEARHILERM DAEALKSSKQ QCVGTILQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)