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AT5G43870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGD5eggNOG:ENOG4110M78EMBL:AP000368EMBL:BT028920
EMBL:CP002688EnsemblPlants:AT5G43870EnsemblPlants:AT5G43870.1entrez:834409
GeneID:834409GO:GO:0005886Gramene:AT5G43870.1hmmpanther:PTHR31351
hmmpanther:PTHR31351:SF4HOGENOM:HOG000237680InterPro:IPR008546InterPro:IPR013666
KEGG:ath:AT5G43870OMA:MAQSPEIPfam:PF05703Pfam:PF08458
PhylomeDB:Q9LKC2Proteomes:UP000006548RefSeq:NP_199200.1TAIR:AT5G43870
UniGene:At.30097UniGene:At.9045UniProt:Q9LKC2
Coordinates (TAIR10) chr5:-:17632538..17635863
Molecular Weight (calculated) 48647.00 Da
IEP (calculated) 10.03
GRAVY (calculated) -0.31
Length 453 amino acids
Sequence (TAIR10)
(BLAST)
001: MDQKSKTIGE QWWRSNPTFK PPETPLDSME FLSRTWSASA TEVSRAVVAS PPTSQPPQMR FSEIQNGSSD VTLVPEDEEN GIVLGNTFSF ASSETSLMVM
101: ERIMAQSPEI SSPRTSGRLS HSSFTDSPPI SPSDIDDFKQ FYRVSPSFNG HIRGSSAIPG TAGGSKTVGR WLKDRREKKR EETRAQNAQL HAAVSVAGVA
201: AAVAAIAAAT ASQSSSGTDE QVAKNDSAVA SAATLVAAKC VEAAEIMGAD REHLASVVSS AVNVRSAGDI MTLTAAAATA LRGAAQLKAR ALKEVWNIAA
301: VIPVDKGTPK GGGGGYRGGE LAPVDNFLGI CSKELLAKGC ELLKRTRKGD LHWKVVSIYI NRTKQVILKT KSKHVAGTIT KKKKNVVVGL VKGLPAWPGR
401: EMLEGGENLR YFGLKTVEKR VIEFECKSQR EYDLWTQGVS MLLSIASDRK HKC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)