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AT4G15630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Uncharacterised protein family (UPF0497)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G15620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:12534eggNOG:ENOG410J0AWeggNOG:ENOG410YQ35EMBL:AK220708
EMBL:AK229320EMBL:AL161542EMBL:AY088726EMBL:BT028921
EMBL:CP002687EMBL:Z97339EnsemblPlants:AT4G15630EnsemblPlants:AT4G15630.1
entrez:827240GeneID:827240Genevisible:Q8L8Z1GO:GO:0005829
GO:GO:0005886GO:GO:0009506GO:GO:0016021GO:GO:0016226
GO:GO:0043424GO:GO:0051536Gramene:AT4G15630.1hmmpanther:PTHR11615
hmmpanther:PTHR11615:SF150HOGENOM:HOG000082766InParanoid:Q8L8Z1IntAct:Q8L8Z1
InterPro:IPR006459InterPro:IPR006702KEGG:ath:AT4G15630OMA:WSYSSAF
PaxDb:Q8L8Z1Pfam:PF04535Pfam:Q8L8Z1PhylomeDB:Q8L8Z1
PIR:C71421PRIDE:Q8L8Z1PRO:PR:Q8L8Z1ProteinModelPortal:Q8L8Z1
Proteomes:UP000006548RefSeq:NP_567473.1STRING:3702.AT4G15630.1TAIR:AT4G15630
TIGRfam:TIGR01569TIGRFAMs:TIGR01569TMHMM:TMhelixUniGene:At.33161
UniProt:Q8L8Z1
Coordinates (TAIR10) chr4:+:8917527..8918683
Molecular Weight (calculated) 20110.70 Da
IEP (calculated) 10.58
GRAVY (calculated) 0.66
Length 190 amino acids
Sequence (TAIR10)
(BLAST)
001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)