AT5G36210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 7796 Blast hits to 7784 proteins in 1167 species: Archae - 215; Bacteria - 4533; Metazoa - 751; Fungi - 258; Plants - 220; Viruses - 0; Other Eukaryotes - 1819 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:14248202..14253272 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81309.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.51 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||
| Length | 730 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALLLLTSLN HLVSFSLTRL PSSSAHNLFL SRSFSSSIRR FNRFSLKPLR SFASMSSSSP DAAQTPLTTA PYGSWKSPIT ADIVSGASKR LGGTAVDSHG 101: RLVLLESRPN ESGRGVLVLQ GETSIDITPK DFAVRTLTQE YGGGAFQISS DDTLVFSNYK DQRLYKQDIT DKDSSPKPIT PDYGTPAVTY ADGVFDSRFN 201: RYVTVREDGR QDRSNPITTI VEVNLSGETL EEPKVLVSGN DFYAFPRLDP KCERLAWIEW SHPNMPWDKA ELWVGYISEG GNIDKRVCVA GCDPKYVESP 301: TEPKWSSRGE LFFVTDRKNG CWNIHKWIES TNEVVSVYPL DGEFAKPLWI FGTNSYEIIE CSEEKNLIAC SYRQKGKSYL GIVDDSQGSC SLLDIPLTDF 401: DSITLGNQCL YVEGASAVLP PSVARVTLDQ HKTKALSSEI VWSSSPDVLK YKAYFSVPEL IEFPTEVPGQ NAYAYFYPPT NPLYNASMEE KPPLLVKSHG 501: GPTAESRGSL NLNIQYWTSR GWAFVDVNYG GSTGYGREYR ERLLRQWGIV DVDDCCGCAK YLVSSGKADV KRLCISGGSA GGYTTLASLA FRDVFKAGAS 601: LYGVADLKML KEEGHKFESR YIDNLVGDEK DFYERSPINF VDKFSCPIIL FQGLEDKVVT PDQSRKIYEA LKKKGLPVAL VEYEGEQHGF RKAENIKYTL 701: EQQMVFFARV VGGFKVADDI TPLKIDNFDT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)