AT5G35580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.734 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 116021 Blast hits to 114684 proteins in 3463 species: Archae - 93; Bacteria - 13781; Metazoa - 42325; Fungi - 9577; Plants - 32686; Viruses - 372; Other Eukaryotes - 17187 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:13761980..13763851 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56175.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.63 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||
| Length | 494 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLCFQDPDN IYSPKKTKKD DGERVITKQK SFLGLSILDI SNPSSTTLSE DLSISLAGSD LHVFTQAELR VITQSFSSSN FLGEGGFGPV HKGFIDDKLR 101: PGLKAQPVAV KLLDLDGLQG HREFMTEVMC LGKLKHPNLV KLIGYCCEEA HRLLVYEFMP RGSLESQLFR RCSLPLPWTT RLNIAYEAAK GLQFLHEAEK 201: PIIYRDFKAS NILLDSDYTA KLSDFGLAKD GPQGDDTHVS TRVMGTQGYA APEYIMTGHL TAKSDVYSFG VVLLELLTGR KSVDIARSSR KETLVEWARP 301: MLNDARKLGR IMDPRLEDQY SETGARKAAT LAYQCLRYRP KTRPDISTVV SVLQDIKDYK DDIPIGIFTY TVPTKPRREV KETSLQNFDK PRRETKVTSL 401: QNFDKTRREV KDTSLQNFDK TRREVKETSL QNFDKTRREV KETSLQNFDK PRNVSTTDNH QKFRSPAHTA RNHRITLRNG YNSPMRNEAG GERY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)