AT5G34940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glucuronidase 3 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
The protein is predicted (WoLF PSORT program) to be membrane-associated. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 353 Blast hits to 349 proteins in 64 species: Archae - 0; Bacteria - 24; Metazoa - 175; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:13235912..13237799 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44738.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.47 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||
| Length | 401 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRRWDELNAF FRKTGTKVIF GLNALSGRSI KSNGEAIGAW NYTNAESFIR FTAENNYTID GWELGNELCG SGVGARVGAN QYAIDTINLR NIVNRVYKNV 101: SPMPLVIGPG GFFEVDWFTE YLNKAENSLN ATTRHIYDLG PGVDEHLIEK ILNPSYLDQE AKSFRSLKNI IKNSSTKAVA WVGESGGAYN SGRNLVSNAF 201: VYSFWYLDQL GMASLYDTKT YCRQSLIGGN YGLLNTTNFT PNPDYYSALI WRQLMGRKAL FTTFSGTKKI RSYTHCARQS KGITVLLMNL DNTTTVVAKV 301: ELNNSFSLRH TKHMKSYKRA SSQLFGGPNG VIQREEYHLT AKDGNLHSQT MLLNGNALQV NSMGDLPPIE PIHINSTEPI TIAPYSIVFV HMRNVVVPAC 401: A |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)