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AT5G26690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Heavy metal transport/detoxification superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G05920.1); Has 700 Blast hits to 667 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 700; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2608eggNOG:KOG1603EMBL:AK118666EMBL:BT004711
EMBL:CP002688EnsemblPlants:AT5G26690EnsemblPlants:AT5G26690.1entrez:832720
GeneID:832720GO:GO:0030001GO:GO:0046872Gramene:AT5G26690.1
hmmpanther:PTHR22814hmmpanther:PTHR22814:SF5HOGENOM:HOG000237719InterPro:IPR006121
KEGG:ath:AT5G26690OMA:IKVTINCPfam:PF00403PhylomeDB:Q8GWS3
Proteomes:UP000006548RefSeq:NP_850876.1SMR:Q8GWS3STRING:3702.AT5G26690.1
SUPFAM:SSF55008TAIR:AT5G26690UniGene:At.30849UniProt:Q8GWS3
Coordinates (TAIR10) chr5:+:9310905..9311411
Molecular Weight (calculated) 12600.50 Da
IEP (calculated) 7.05
GRAVY (calculated) -0.22
Length 114 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTKKIEIKV DIDCEKCKHA IMEAVTELEG VNIVSLDQEK SILTVVGTMD PVCVAEQLKK INKKPVVISV GPPKKPDPKP DPKKDPCFIP YCYYTPRDMV
101: SVNTYESGSG CTIV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)