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AT5G25130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.604
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 12
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 12 (CYP71B12); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: ytochrome p450, family 71, subfamily B, polypeptide 11 (TAIR:AT5G25120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G25130-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AC005964EMBL:AC006259EMBL:BT030466EMBL:CP002688
EnsemblPlants:AT5G25130EnsemblPlants:AT5G25130.1entrez:832584Gene3D:1.10.630.10
GeneID:832584Genevisible:Q9ZU07GO:GO:0005506GO:GO:0016020
GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550
GO:GO:0098542Gramene:AT5G25130.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144
HOGENOM:HOG000218629InParanoid:Q9ZU07InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT5G25130KO:K00517ncoils:Coil
OMA:FDVECCSPaxDb:Q9ZU07Pfam:PF00067Pfam:Q9ZU07
PhylomeDB:Q9ZU07PRIDE:Q9ZU07PRINTS:PR00385PRINTS:PR00463
PRO:PR:Q9ZU07PROSITE:PS00086ProteinModelPortal:Q9ZU07Proteomes:UP000006548
RefSeq:NP_197895.1scanprosite:PS00086SMR:Q9ZU07STRING:3702.AT5G25130.1
SUPFAM:SSF48264TAIR:AT5G25130tair10-symbols:CYP71B12TMHMM:TMhelix
UniGene:At.30927UniProt:Q9ZU07
Coordinates (TAIR10) chr5:+:8668521..8670104
Molecular Weight (calculated) 56734.90 Da
IEP (calculated) 9.48
GRAVY (calculated) -0.07
Length 496 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLWYIIVAF VFFSSMIIVR IIRKTKKNLP PGPPRLPIIG NLHQLGSKPH RSMFKLSETY GPLMSLKFGS VSTVVASTPE TVKEVLKTFD VECCSRPNMT
101: YPARVTYNLK DLCFSPYSKY WREVRKMTVV ELYTAKRVQS FQHTRKEEVA ALVDFIKQAA SLEKPVNLNK KLMKLSGSVI CRVAFGINLQ GSKLENTYEE
201: VIQGTVELVG SFAAADYFPV VGRIIDRITG LHSKCEKLFK AMDAFFDQSI KHHLEDEIIK DDIIDLLLKM ERGETTLGEF QLTRDHTKGI LANILNAGID
301: TSAQVMTWVM TYLISNPRVL KKAQAEVREV IKHKDDIIEE DIERLQYLKM VIKETFRINP LVPLLIPREA SKDVKIGGYN IPKKTWIHVN IWAIHRNPNV
401: WKDPEAFIPE RFMDSQIDYK GLNFELLPFG SGRRICPGIG MGMALVHLTL INLLYRFDWK LPEGMKVADV DLEESYGLVC PKKIPLQLIP VLTQWT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)