suba logo
AT5G24360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : inositol requiring 1-1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
inositol requiring 1-1 (IRE1-1); FUNCTIONS IN: endoribonuclease activity, producing 5'-phosphomonoesters, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, mRNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyrrolo-quinoline quinone beta-propeller repeat (InterPro:IPR018391), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: Endoribonuclease/protein kinase IRE1-like (TAIR:AT2G17520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-465-MONOMERBioCyc:ARA:GQT-466-MONOMEREC:2.7.11.1EC:3.1.26.-
eggNOG:COG0515eggNOG:KOG1027EMBL:AB016884EMBL:AB049936
EMBL:AY057480EMBL:AY057897EMBL:CP002688EnsemblPlants:AT5G24360
EnsemblPlants:AT5G24360.1entrez:832507ExpressionAtlas:Q93VJ2Gene3D:2.140.10.10
GeneID:832507Genevisible:Q93VJ2GO:GO:0004540GO:GO:0004674
GO:GO:0005524GO:GO:0005783GO:GO:0005789GO:GO:0006351
GO:GO:0006355GO:GO:0006397GO:GO:0006986GO:GO:0008380
GO:GO:0009751GO:GO:0009816GO:GO:0016021GO:GO:0034263
GO:GO:0046872hmmpanther:PTHR13954hmmpanther:PTHR13954:SF13HOGENOM:HOG000084349
InParanoid:Q93VJ2InterPro:IPR000719InterPro:IPR008271InterPro:IPR010513
InterPro:IPR011009InterPro:IPR011047InterPro:IPR018997InterPro:IPR027295
iPTMnet:Q93VJ2KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1PaxDb:Q93VJ2
Pfam:PF00069Pfam:PF06479Pfam:Q93VJ2Pfscan:PS50011
Pfscan:PS51392PhylomeDB:Q93VJ2PRIDE:Q93VJ2PRO:PR:Q93VJ2
PROSITE:PS00108PROSITE:PS50011PROSITE:PS51392ProteinModelPortal:Q93VJ2
Proteomes:UP000006548Reactome:R-ATH-381070RefSeq:NP_568444.1scanprosite:PS00108
SMART:SM00220SMART:SM00580SMR:Q93VJ2STRING:3702.AT5G24360.2
SUPFAM:SSF50998SUPFAM:SSF56112TAIR:AT5G24360tair10-symbols:ATIRE1-1
tair10-symbols:IRE1-1TMHMM:TMhelixUniGene:At.26226UniProt:Q93VJ2
Coordinates (TAIR10) chr5:+:8316627..8319827
Molecular Weight (calculated) 99621.00 Da
IEP (calculated) 7.20
GRAVY (calculated) -0.30
Length 881 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGSALLDLI LFLLVSPLAH SFKGSEISKF YDKSISNQIS QSDRESGYVL VSTVDGSISL VDMSSQKLDW TFHTNEPIYS SYQAPHYHYT TDEERSSVLG
101: DDFYMDCDKD WRLYNSSVRK GKRVNEIVDA SEFIGTLPYT STDRIVLGKK DTSVFLLDWK TGKLVKRYRM DELYSNTVVE NDKEKAIVLS KEAPLLFGSG
201: FKKSEDFPEL VYIERKDFKI QCISKFGDVL WSVSYAKMEA KLQNHESVQF ISGLSSSVGK NQFPLSYTTS VPMVQLRNVK YETLFPRLGF LDEALYLPFQ
301: DRKPNQLAIG DGNQLTLPGN KEAEEVLSLP LPETVISQIT DIIDGSTKQA GFASKFSGLI VLIFGFCVTM LSVCGLFFYR LRQSIRIKEP YVSEVPIATP
401: KKKKSKKNGT TKAVHKKENG FISGGNKDPS HEENEKRLLT AFPGLNNSSA EGYRVGKLFV SNKEIAKGSN GTVVLEGSYE GRLVAVKRLV QSHHDVAQKE
501: ILNLMASDKH SNIVRWYGVD QDEHFIYISL ELCACSLNDL IYASSALLES PMASSSIHSI QINPIFENGK GVELWKENGH PSPVLLKLMR DIVAGLVHLH
601: DIGIVHRDLK PQNVLIVKNS SLCAKLSDMG ISKRLPADTS ALTRNSTGLG SGSSGWQAPE QLRNERQTRA VDLFSLGCVL FFCMTGGKHP YGDNYERDVN
701: VLNDQKDLFL IESLPEAVHL LTGLLNPDPN LRPRAQDVMH HPLFWNSDMR LSFLRDASDR VELENREEGS QLLAALESTA AVTLNGRWDE KLDSIFLDNI
801: GRYRRYKFDS IRDLLRVIRN KLNHYRELPK ELQELLGSVP EGFERYFSSR FPKLLIQVYT VLFDYCNNEE FFFKYSKTTV F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)