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AT5G23210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24393051 (2015): extracellular region
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:16729891 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine carboxypeptidase-like 34
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3785 Blast hits to 3735 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 634; Fungi - 858; Plants - 1544; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G23210-MONOMERBioCyc:ARA:GQT-1129-MONOMERBioCyc:ARA:GQT-1130-MONOMERBioCyc:ARA:GQT-1131-MONOMER
EC:3.4.16.-eggNOG:COG2939eggNOG:KOG1282EMBL:AB007648
EMBL:AK228998EMBL:CP002688EnsemblPlants:AT5G23210EnsemblPlants:AT5G23210.1
entrez:832385ESTHER:arath-SCPL34ExpressionAtlas:Q0WPR4Gene3D:3.40.50.1820
GeneID:832385Genevisible:Q0WPR4GO:GO:0004185GO:GO:0005576
GO:GO:0005773GO:GO:0009505GO:GO:0051603hmmpanther:PTHR11802
hmmpanther:PTHR11802:SF31HOGENOM:HOG000198295InParanoid:Q0WPR4InterPro:IPR001563
InterPro:IPR018202InterPro:IPR029058InterPro:IPR033124MEROPS:S10.A39
OMA:WFFEATTPANTHER:PTHR11802PaxDb:Q0WPR4Pfam:PF00450
Pfam:Q0WPR4PhylomeDB:Q0WPR4PRIDE:Q0WPR4PRINTS:PR00724
PRO:PR:Q0WPR4PROSITE:PS00131PROSITE:PS00560ProteinModelPortal:Q0WPR4
Proteomes:UP000006548RefSeq:NP_001078616.1RefSeq:NP_851062.2scanprosite:PS00131
scanprosite:PS00560SMR:Q0WPR4STRING:3702.AT5G23210.1SUPFAM:SSF53474
TAIR:AT5G23210tair10-symbols:SCPL34UniGene:At.67035UniGene:At.8802
UniProt:Q0WPR4
Coordinates (TAIR10) chr5:+:7810892..7814837
Molecular Weight (calculated) 56331.90 Da
IEP (calculated) 8.63
GRAVY (calculated) -0.32
Length 499 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSHSVEFSV LVLFLVSFLL GSTSAEKLCS DNDGDNGCFR SRVLAAQRAD RVKELPGQPP VKFRQYAGYV TVNETHGRAL FYWFFEATQN PSKKPVLLWL
101: NGGPGCSSIG FGAAEELGPF FPQNSSQPKL KLNPYSWNKA ANLLFLESPV GVGFSYTNTS RDIKQLGDTV TARDSYNFLV NWFKRFPQYK SHDFYIAGES
201: YAGHYVPQLS ELIYKENKIA SKKDFINLKG LMIGNALLDD ETDQKGMIEY AWDHAVISDA LYEKVNKNCD FKQKLVTKEC NDALDEYFDV YKILDMYSLY
301: APKCVPTSTN SSTSHSVAGN RPLPAFRSIL RPRLISHNEG WRRMAAGYDP CASEYTEKYM NRKDVQEALH ANVTNISYPW THCSDTVSFW SDAPASMLPT
401: LRTLVSAGLR VWVFSGDTDG RIPVTATRYS LKKLGLKIVQ DWTPWYTKLQ VGGWTVEYDG LMFVTVRGAG HQVPTFKPRE ALQLIHHFLG NKKLPTFPF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)