AT5G22620.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : phosphoglycerate/bisphosphoglycerate mutase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1); Has 12570 Blast hits to 12455 proteins in 2295 species: Archae - 57; Bacteria - 9376; Metazoa - 676; Fungi - 332; Plants - 188; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:7517731..7520223 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 53117.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 482 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MISLPLTTPI LPSRCLLHKT RRQNSTRRRL LIRSSSSLQD QFTVETTKRV VLVRHGQSTW NEEGRIQGSS DFSVLTKKGE SQAEISRQML IDDSFDVCFT 101: SPLKRSKKTA EIIWGSRESE MIFDYDLREI DLYSFQGLLK KEGKEKFGEA FKQWQEDPAN FIIDGHYPVR ELWSRARSCW PGILAHESKS VLVVAHNAVN 201: QALLATAIGL GTEYFRSLLQ SNCGVSVLDF IPRADGGSPH VCLNRLNQTP NSPLAGGSSG GRKASKQIIL VCHGQGNNED SAVINQAANN DQAMNMLGVI 301: HSQKTAELLL DLRVSSIVCS PKTASIESSG VISRVQEAAG CLGVDNVPHY VKTKQMNELD VESVLRKSNK DNDVIASQLD EEAFSALWNR SEKAWESLLD 401: ELSDEKSNPG EIMVVVGPAM THISLIAQCL NLTKEALGLF HLDAGSISVI DFPDGPSSKG VIRCTNYTAH LGRWSIPITK PA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)