AT5G16800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.893 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1); Has 1133 Blast hits to 1133 proteins in 406 species: Archae - 80; Bacteria - 421; Metazoa - 264; Fungi - 72; Plants - 125; Viruses - 2; Other Eukaryotes - 169 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:5524720..5526295 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27196.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.17 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||
| Length | 236 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRFPRGFVE NSSMEEPKIA RRPTICFRPI NPSDLERLEQ IHRDIFPIRY ESEFFQNVVN GGDIVSWAAV DRSRPDGHSE ELIGFVTAKI VLAKESEISD 101: LIRYDSSKGE GTLVYILTLG VVETYRKRGI AKALINEVVK YSSGIPVCRG VYLHVIAHNN PAIRLYKRMS FRCVRRLHGF YLINGQHFDS YLFVYFINGS 201: RSPCSPLYVQ NTSIFCILNS VCCDVSLRFL HRWGYR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)