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AT1G54115.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.839
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cation calcium exchanger 4
Curator
Summary (TAIR10)
Involved in cation (Na and K) homeostasis.
Computational
Description (TAIR10)
cation calcium exchanger 4 (CCX4); FUNCTIONS IN: cation:cation antiporter activity; INVOLVED IN: cation transport, cellular cation homeostasis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation exchanger 9 (TAIR:AT3G14070.1); Has 4016 Blast hits to 3229 proteins in 801 species: Archae - 54; Bacteria - 848; Metazoa - 1841; Fungi - 309; Plants - 226; Viruses - 0; Other Eukaryotes - 738 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0530eggNOG:KOG2399EMBL:AC006577EMBL:CP002684
EnsemblPlants:AT1G54115EnsemblPlants:AT1G54115.1entrez:841851GeneID:841851
Genevisible:Q9SYG9GO:GO:0006812GO:GO:0006813GO:GO:0006814
GO:GO:0015297GO:GO:0016021Gramene:AT1G54115.1hmmpanther:PTHR12266
hmmpanther:PTHR12266:SF9HOGENOM:HOG000243457InParanoid:Q9SYG9InterPro:IPR004837
KEGG:ath:AT1G54115KO:K13754OMA:GVHRERIPaxDb:Q9SYG9
Pfam:PF01699Pfam:Q9SYG9PhylomeDB:Q9SYG9PIR:B96582
PRO:PR:Q9SYG9ProteinModelPortal:Q9SYG9Proteomes:UP000006548Reactome:R-ATH-425561
RefSeq:NP_564650.1STRING:3702.AT1G54115.1TAIR:AT1G54115tair10-symbols:ATCCX4
tair10-symbols:CCX4TMHMM:TMhelixUniGene:At.37278UniProt:Q9SYG9
Coordinates (TAIR10) chr1:+:20202118..20204052
Molecular Weight (calculated) 70805.40 Da
IEP (calculated) 5.49
GRAVY (calculated) 0.43
Length 644 amino acids
Sequence (TAIR10)
(BLAST)
001: MRAVNFMYSS NNPKFRGIFN GLCAIILFIF FFDQSDIYRN PLLKNLSFVD SSGKFNRGFS QFTVPRRHLS EVDTNGSSGN SSLSGDSTVS CSGLHEHRGY
101: ADQCEFLKSN PICSPDGFFD YLKFFYCSCR DFKILGYILL GVWLVALFYL LGNTAADYFC CSLEKLSKLL RLPPTVAGVT LLPLGNGAPD VFASIAAFVG
201: SDKGEVGLNS VLGGAVFVTC VVVGIVSLCV ADKEVKIDKK CFIRDLSFFL FTLVALMVIL MVGKVTVGIA IAFVSIYVFY ASLVAANEIL RKHSRRLKLD
301: SITPLLPMQG SVFSSPSVEE DIPMYSPLME LDTGEGPPRL HDSLPQWMWA TNVAIYSNHF AKANVHDEER PPWGWTEDGA EVESSLCSKI TSLLETPLTV
401: PRRLTIPLIE EDSWSKTYAV ASVSLAPVLL SFLWSSQDDT SLQARIVAYF IGIAIGSTLG YLAFKNTEPD RPPQIYLIPW VLGGFIMSIV WFYMIANELV
501: ALLVTFGGIY GINPSILGLT VLAWGNSMGD LVSNIALSMN GGDGVQIALS GCYAGPMFNT LVGLGMSMFL GAWSKSPETY MIPEDNSLFY TLGFLIFGLI
601: WSLVMLPRNE MRPNKVMGIG LITLYLIFVT FRLSSAMGFI PWAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)