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AT5G15140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactose mutarotase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01260.1); Has 86054 Blast hits to 36023 proteins in 2379 species: Archae - 275; Bacteria - 25650; Metazoa - 19137; Fungi - 9557; Plants - 4507; Viruses - 809; Other Eukaryotes - 26119 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G15140-MONOMEReggNOG:COG2017eggNOG:KOG1604EMBL:AL353993
EMBL:CP002688EMBL:DQ446952EnsemblPlants:AT5G15140EnsemblPlants:AT5G15140.1
entrez:831366Gene3D:2.70.98.10GeneID:831366GO:GO:0005975
GO:GO:0016853GO:GO:0030246Gramene:AT5G15140.1gramene_pathway:5.1.3.3
gramene_pathway:PWY-6317hmmpanther:PTHR10091hmmpanther:PTHR10091:SF10HOGENOM:HOG000072798
InterPro:IPR008183InterPro:IPR011013InterPro:IPR014718KEGG:ath:AT5G15140
KO:K01785OMA:MEVAVTNPfam:PF01263PhylomeDB:Q9LXG7
PIR:T49949Proteomes:UP000006548RefSeq:NP_197018.1SMR:Q9LXG7
STRING:3702.AT5G15140.1SUPFAM:SSF74650TAIR:AT5G15140TMHMM:TMhelix
UniGene:At.31838UniProt:Q9LXG7
Coordinates (TAIR10) chr5:+:4908686..4910670
Molecular Weight (calculated) 54522.70 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.97
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MARSSVLLCL ILLVTLGVVI SVTFADNVEL KSKDLESSKK DKKVDHDSTH KEKGGEKVDG AGSDDEDNDK KEKKKEHDVQ KKDKQHENKD KDDEKKHVDK
101: KKSGGHDKDD DDEKKHKDKK KDGHNDDDDS DDDTDDDDDD DDDDDDDDEV DGDDNEKEKI GLYELKKGNL TVKFTNWGAS IISLHFPDKN GKMDDIVLGY
201: DSVKTYKTDK VYFGATVGRV ANRIGKGKFK LNGKEYKTSV NDGKNTLHGG KKGFGDVVWA VAKHQYDGKK PHIVFTHTSP DGDQGFPGEL SVTVTYKLVK
301: DNELSVVMEA KPKDKATPVN LAHHSYWNLG GHNSGDILSE EIQILGSGYT PVDGELIPTG KINPVKGTAY DFLQLRPIKD NMKDLKTGYD INYCLDGKAK
401: KMRKIVELVD KKSGRKMELS GNQAGLQFYT GGMLKDVKGK NGAVYQAFGG LCLETQSYPD ALNHPKFPSQ IVEPGKKYKH TMLFKFSIVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)