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AT5G14220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.500
plastid 0.500
ASURE: mitochondrion,plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Flavin containing amine oxidoreductase family
Curator
Summary (TAIR10)
Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development.
Computational
Description (TAIR10)
HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G14220-MONOMERBioCyc:ARA:GQT-1544-MONOMERDNASU:831272EC:1.3.3.4
eggNOG:COG1232eggNOG:KOG1276EMBL:AB007650EMBL:AL163817
EMBL:AY075665EMBL:AY101523EMBL:CP002688EnsemblPlants:AT5G14220
EnsemblPlants:AT5G14220.1entrez:831272Gene3D:3.40.50.720Gene3D:3.90.660.20
GeneID:831272Genevisible:Q8S9J1GO:GO:0004729GO:GO:0005739
GO:GO:0006782GO:GO:0009507GO:GO:0009536GO:GO:0009793
GO:GO:0009941GO:GO:0015995gramene_pathway:1.3.3.4gramene_pathway:CHLOROPHYLL-SYN
gramene_pathway:HEME-BIOSYNTHESIS-IIhmmpanther:PTHR10742hmmpanther:PTHR10742:SF229HOGENOM:HOG000269479
InParanoid:Q8S9J1InterPro:IPR002937InterPro:IPR004572InterPro:IPR016040
InterPro:IPR023753InterPro:IPR027418KEGG:00860+1.3.3.4KEGG:ath:AT5G14220
KO:K00231OMA:FYAGNHKPaxDb:Q8S9J1Pfam:PF01593
Pfam:Q8S9J1PhylomeDB:Q8S9J1PIR:T48595PRIDE:Q8S9J1
PRO:PR:Q8S9J1ProMEX:Q8S9J1ProteinModelPortal:Q8S9J1Proteomes:UP000006548
Reactome:R-ATH-189451RefSeq:NP_001190307.1RefSeq:NP_196926.2SMR:Q8S9J1
STRING:3702.AT5G14220.1SUPFAM:SSF51905SUPFAM:SSF54373TAIR:AT5G14220
tair10-symbols:HEMG2tair10-symbols:MEE61tair10-symbols:PPO2TIGRfam:TIGR00562
TIGRFAMs:TIGR00562UniGene:At.20436UniPathway:UPA00251UniPathway:UPA00668
UniProt:Q8S9J1
Coordinates (TAIR10) chr5:-:4583506..4587369
Molecular Weight (calculated) 55633.40 Da
IEP (calculated) 8.42
GRAVY (calculated) -0.30
Length 508 amino acids
Sequence (TAIR10)
(BLAST)
001: MASGAVADHQ IEAVSGKRVA VVGAGVSGLA AAYKLKSRGL NVTVFEADGR VGGKLRSVMQ NGLIWDEGAN TMTEAEPEVG SLLDDLGLRE KQQFPISQKK
101: RYIVRNGVPV MLPTNPIELV TSSVLSTQSK FQILLEPFLW KKKSSKVSDA SAEESVSEFF QRHFGQEVVD YLIDPFVGGT SAADPDSLSM KHSFPDLWNV
201: EKSFGSIIVG AIRTKFAAKG GKSRDTKSSP GTKKGSRGSF SFKGGMQILP DTLCKSLSHD EINLDSKVLS LSYNSGSRQE NWSLSCVSHN ETQRQNPHYD
301: AVIMTAPLCN VKEMKVMKGG QPFQLNFLPE INYMPLSVLI TTFTKEKVKR PLEGFGVLIP SKEQKHGFKT LGTLFSSMMF PDRSPSDVHL YTTFIGGSRN
401: QELAKASTDE LKQVVTSDLQ RLLGVEGEPV SVNHYYWRKA FPLYDSSYDS VMEAIDKMEN DLPGFFYAGN HRGGLSVGKS IASGCKAADL VISYLESCSN
501: DKKPNDSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)