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AT5G13430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Ubiquinol-cytochrome C reductase iron-sulfur subunit
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: male gametophyte, guard cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G13430-MONOMEREC:1.10.2.2eggNOG:COG0723eggNOG:KOG1671
EMBL:AF375413EMBL:AY066055EMBL:CP002688EnsemblPlants:AT5G13430
EnsemblPlants:AT5G13430.1entrez:831184Gene3D:1.20.5.270Gene3D:2.102.10.10
GeneID:831184GO:GO:0005739GO:GO:0005750GO:GO:0008121
GO:GO:0016020GO:GO:0046872GO:GO:0051537Gramene:AT5G13430.1
hmmpanther:PTHR10134hmmpanther:PTHR10134:SF1IntAct:Q94JS0InterPro:IPR004192
InterPro:IPR005805InterPro:IPR006317InterPro:IPR014349InterPro:IPR017941
KEGG:00190+1.10.2.2KEGG:ath:AT5G13430KO:K00411OMA:FVVSRDH
PANTHER:PTHR10134Pfam:PF00355Pfam:PF02921Pfscan:PS51296
PhylomeDB:Q94JS0PRINTS:PR00162PRO:PR:Q94JS0PROSITE:PS51296
Proteomes:UP000006548RefSeq:NP_568288.1SMR:Q94JS0STRING:3702.AT5G13430.1
SUPFAM:SSF50022SUPFAM:SSF81502TAIR:AT5G13430TIGRfam:TIGR01416
TIGRFAMs:TIGR01416UniGene:At.28659UniProt:Q94JS0
Coordinates (TAIR10) chr5:-:4305414..4307399
Molecular Weight (calculated) 29609.20 Da
IEP (calculated) 8.59
GRAVY (calculated) -0.16
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRVAGRRLF SVSQRSSTAT SFVVSRDHTL SDGGGDSSSA PRSLPSADLS SYHRSLIRGF SSQVLAQGNE IGFGSEVPAT VEAVKTPNSK IVYDDHNHER
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)