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AT2G46505.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : succinate dehydrogenase subunit 4
Curator
Summary (TAIR10)
Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion.
Computational
Description (TAIR10)
succinate dehydrogenase subunit 4 (SDH4); FUNCTIONS IN: succinate dehydrogenase (ubiquinone) activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 61 Blast hits to 61 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT2G46505-MONOMEReggNOG:ENOG410JQ89eggNOG:ENOG4111593EMBL:AC006418
EMBL:AC006526EMBL:AY052323EMBL:AY061903EMBL:AY084510
EMBL:BK000036EMBL:CP002685EnsemblPlants:AT2G46505EnsemblPlants:AT2G46505.1
entrez:819261GeneID:819261Genevisible:Q941A0GO:GO:0005739
GO:GO:0005749GO:GO:0006099GO:GO:0008177GO:GO:0016020
GO:GO:0016021GO:GO:0045273GO:GO:0046872Gramene:AT2G46505.1
hmmpanther:PTHR36358HOGENOM:HOG000151159KEGG:ath:AT2G46505OMA:HIHEGME
PaxDb:Q941A0Pfam:Q941A0PRIDE:Q941A0PRO:PR:Q941A0
ProteinModelPortal:Q941A0Proteomes:UP000006548RefSeq:NP_566077.1STRING:3702.AT2G46505.1
SUPFAM:SSF81343TAIR:AT2G46505tair10-symbols:SDH4UniGene:At.23852
UniPathway:UPA00223UniProt:Q941A0
Coordinates (TAIR10) chr2:-:19090013..19090468
Molecular Weight (calculated) 16842.50 Da
IEP (calculated) 10.92
GRAVY (calculated) -0.04
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLRRTILDL HRQTQRATLS KSLPFSMSHI SSASATAAVR NPLGRDLSSI PFAQAQKLKP DSTNLVTDRS ISSSIGQSEL NKAAKFSRQS SSRGYTNGSF
101: LRKIPVVFHI HEGMEEILAD YVHQEMTRNL IVMSLGLFQI IVLKDIILFL L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)