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AT5G12290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : dgd1 suppressor 1
Curator
Summary (TAIR10)
Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.
Computational
Description (TAIR10)
DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ3SeggNOG:ENOG4110107EMBL:AK118777EMBL:AL592312
EMBL:BT002450EMBL:BT008365EMBL:CP002688EnsemblPlants:AT5G12290
EnsemblPlants:AT5G12290.1entrez:831104GeneID:831104GO:GO:0005739
GO:GO:0005741GO:GO:0016021GO:GO:0019375GO:GO:0043234
GO:GO:0050665Gramene:AT5G12290.1hmmpanther:PTHR28234hmmpanther:PTHR28234:SF1
HOGENOM:HOG000030590InterPro:IPR013946KEGG:ath:AT5G12290KO:K18158
ncoils:CoilOMA:CEQATREPfam:PF08637PhylomeDB:Q8GUK1
Proteomes:UP000006548RefSeq:NP_568262.2STRING:3702.AT5G12290.1TAIR:AT5G12290
tair10-symbols:DGS1TMHMM:TMhelixUniGene:At.46013UniProt:Q8GUK1
Coordinates (TAIR10) chr5:-:3974374..3978066
Molecular Weight (calculated) 68898.00 Da
IEP (calculated) 7.10
GRAVY (calculated) -0.24
Length 602 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSQPPVNES TPSTALSNFG ELVPFYSSYL WNRLASLLPT SKPIFLGKIS NLYRQTVSRK RSISFPLPLP SDFPSSSTIT SNVSADTARI HGVLEEIMAD
101: VLSNLHDIQK SLDFWRSRAE GSNARKAYFM IFERGPTAFV NESTKFVSKS LSEDSAMQHL CQSSSSHMTE RMRVLVELRS ALASFIAQLY VELDKRGEDL
201: VKIPEKALPS LLAVINGLFS NLEGSFSHLH AVRECDSSVD GSYPMPLVFD RLPEVNEEGS QWTDCELTDA INLVHKNLEK LNSYLSVMVG KHRKPRRMTL
301: YWVRYTCGAV GLSVFSIWLL RHSSLMGSSD IENWVHDAKE ATMSFFSDHV EQPLLSIRDE LFDTFRKRHK GVMETEEVQL TQDSLHRMLR NFCEQATREK
401: VPDNASDQEM LEVVMNRYEK ELVHPIHNLL SGELARGLLI QVQKLKLDIE TAMLELDQIL RANEINFAIL AALPAFFLSI VMLTVLRTWL KKDSKAQGRG
501: RIARIHRRLL VVEIEKRIMQ YQSYIEQGRD KDAETVFGLL IYSLERLYRV VEKPARATDE WDLVKQDLIE LGRPQQQTSY KLTVTQRLVT VYDCLLPTLK
601: RQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)