AT5G10860.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Cystathionine beta-synthase (CBS) family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: cobalt ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G47271.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:3429173..3430142 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 22730.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.46 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 206 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MQGVIRSFVS GGNVVKGSVL QHLRVINPAI QPSVFCSRSE STQPARMEES GFESTTISDV MKSKGKSADG SWLWCTTDDT VYDAVKSMTQ HNVGALVVVK 101: PGEQQALAGI ITERDYLRKI IVQGRSSKST KVGDIMTEEN KLITVTPETK VLRAMQLMTD NRIRHIPVIK DKGMIGMVSI GDVVRAVVHE HREELQRLNA 201: YIQGGY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)