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AT5G10150.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Domain of unknown function (DUF966)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWQ1eggNOG:ENOG410YC81EMBL:AL356332EMBL:BT014891
EMBL:BT015021EMBL:CP002688EnsemblPlants:AT5G10150EnsemblPlants:AT5G10150.1
entrez:830879GeneID:830879Gramene:AT5G10150.1hmmpanther:PTHR31083
hmmpanther:PTHR31083:SF6HOGENOM:HOG000238453InParanoid:Q9LX14InterPro:IPR010369
InterPro:IPR021182iPTMnet:Q9LX14KEGG:ath:AT5G10150OMA:QMISCGH
PaxDb:Q9LX14Pfam:PF06136Pfam:Q9LX14PhylomeDB:Q9LX14
PIR:T50019PIRSF:PIRSF031043PRIDE:Q9LX14PRO:PR:Q9LX14
ProteinModelPortal:Q9LX14Proteomes:UP000006548RefSeq:NP_196577.1STRING:3702.AT5G10150.1
TAIR:AT5G10150UniGene:At.32412UniProt:Q9LX14
Coordinates (TAIR10) chr5:-:3182176..3183834
Molecular Weight (calculated) 47955.60 Da
IEP (calculated) 8.30
GRAVY (calculated) -0.96
Length 414 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAVRCRRGR ENNKSPERII RSLNHHQHDE ELEEEVKTKK PIFRRVQVVY YLTRNGHLEH PHFIEVISPV NQPLRLRDVM NRLTILRGKC MTSQYAWSCK
101: RSYRNGFVWN DLAENDVIYP SDCAEYVLKG SEITDKFQEV HVNRPLSGSI QEAPKSRLLR SKLKPQNRTA SFDDAELYVG EEEEEEDGEY ELYEEKTSYT
201: SSTTPQSRCS RGVSTETMES TEQKPNLTKT EQDLQVRSDS SDLTRSNPVV KPRRHEVSTR VEDGDPVEPG SGRGSMWLQM ISCGHIATKY YAPSVMNPRQ
301: KEENLRKGVL CKNIVKKTVV DDEREMIRFM SENPRFGNPQ AEEKEYFSGS IVESVSQERV TAEPSLRRSN SFNEERSKIV EMAKETKKKE ERSMAKVKCI
401: PRTCLMSSSK QIKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)