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AT5G09740.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : histone acetyltransferase of the MYST family 2
Curator
Summary (TAIR10)
Encodes an enzyme with histone acetyltransferase activity. HAM2 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM2.
Computational
Description (TAIR10)
histone acetyltransferase of the MYST family 2 (HAM2); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), MOZ/SAS-like protein (InterPro:IPR002717), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 1 (TAIR:AT5G64610.1); Has 1635 Blast hits to 1565 proteins in 235 species: Archae - 0; Bacteria - 4; Metazoa - 872; Fungi - 459; Plants - 89; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G09740-MONOMERBioGrid:16112BRENDA:2.3.1.48EC:2.3.1.48
eggNOG:COG5027eggNOG:KOG2747EMBL:AB020752EMBL:AB493744
EMBL:AK117126EMBL:AL353994EMBL:AY086663EMBL:CP002688
EnsemblPlants:AT5G09740EnsemblPlants:AT5G09740.1EnsemblPlants:AT5G09740.2entrez:830834
ExpressionAtlas:Q9LXD7Gene3D:3.40.630.30GeneID:830834Genevisible:Q9LXD7
GO:GO:0004402GO:GO:0005634GO:GO:0006281GO:GO:0006351
GO:GO:0006355GO:GO:0010224GO:GO:0016573GO:GO:0046872
Gramene:AT5G09740.2hmmpanther:PTHR10615hmmpanther:PTHR10615:SF103HOGENOM:HOG000182457
InParanoid:Q9LXD7InterPro:IPR000953InterPro:IPR002717InterPro:IPR016181
InterPro:IPR016197InterPro:IPR025995KEGG:ath:AT5G09740KO:K11308
OMA:KIDETHIPaxDb:Q9LXD7Pfam:PF01853Pfam:PF11717
Pfam:Q9LXD7Pfscan:PS51726PhylomeDB:Q9LXD7PIR:T49924
PRIDE:Q9LXD7PRO:PR:Q9LXD7PROSITE:PS51726ProteinModelPortal:Q9LXD7
Proteomes:UP000006548Reactome:R-ATH-2559586Reactome:R-ATH-3214847Reactome:R-ATH-5693548
Reactome:R-ATH-5693565RefSeq:NP_001078558.1RefSeq:NP_196536.1SMART:SM00298
SMR:Q9LXD7STRING:3702.AT5G09740.1SUPFAM:SSF54160SUPFAM:SSF55729
TAIR:AT5G09740tair10-symbols:HAM2UniGene:At.32464UniProt:Q9LXD7
Coordinates (TAIR10) chr5:-:3022141..3024711
Molecular Weight (calculated) 51369.30 Da
IEP (calculated) 7.39
GRAVY (calculated) -0.66
Length 445 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSANTETN GNAPPPSSNQ KPPATNGVDG SHPPPPPLTP DQAIIESDPS KKRKMGMLPL EVGTRVMCRW RDGKHHPVKV IERRRIHNGG QNDYEYYVHY
101: TEFNRRLDEW TQLDQLDLDS VECAVDEKVE DKVTSLKMTR HQKRKIDETH IEGHEELDAA SLREHEEFTK VKNISTIELG KYEIETWYFS PFPPEYNDCV
201: KLFFCEFCLN FMKRKEQLQR HMRKCDLKHP PGDEIYRSGT LSMFEVDGKK NKVYAQNLCY LAKLFLDHKT LYYDVDLFLF YVLCECDDRG CHMVGYFSKE
301: KHSEEAYNLA CILTLPSYQR KGYGKFLIAF SYELSKKEGK VGTPERPLSD LGLLSYRGYW TRVLLEILKK HKGNISIKEL SDVTAIKAED ILSTLQSLEL
401: IQYRKGQHVI CADPKVLDRH LKAAGRGGLD VDASKLIWTP YKDQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)