suba logo
AT5G05000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : translocon at the outer envelope membrane of chloroplasts 34
Curator
Summary (TAIR10)
Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.
Computational
Description (TAIR10)
translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:3.6.5.-eggNOG:ENOG410IERBeggNOG:ENOG410ZHTPEMBL:BT044057
EnsemblPlants:AT5G05000EnsemblPlants:AT5G05000.1EnsemblPlants:AT5G05000.2EnsemblPlants:AT5G05000.3
entrez:830382ExpressionAtlas:B5RID3Gene3D:3.40.50.300GeneID:830382
GO:GO:0005525GO:GO:0006886GO:GO:0009707GO:GO:0015450
GO:GO:0016021GO:GO:0016787Gramene:AT5G05000.1Gramene:AT5G05000.2
Gramene:AT5G05000.3hmmpanther:PTHR10903InterPro:IPR005688InterPro:IPR006703
InterPro:IPR027417KEGG:ath:AT5G05000OMA:WVPNLMKPaxDb:B5RID3
Pfam:PF04548Pfam:Q38906Pfscan:PS51720PhylomeDB:B5RID3
PIRSF:PIRSF038134PRIDE:B5RID3PROSITE:PS51720ProteinModelPortal:B5RID3
RefSeq:NP_196119.1RefSeq:NP_850768.1RefSeq:NP_974732.1SMR:B5RID3
STRING:3702.AT5G05000.1SUPFAM:SSF52540TAIR:AT5G05000tair10-symbols:ATTOC34
tair10-symbols:OEP34tair10-symbols:TOC34TIGRfam:TIGR00991TIGRFAMs:TIGR00991
UniGene:At.67852UniGene:At.8379UniProt:B5RID3UniProt:Q38906
Coordinates (TAIR10) chr5:-:1474262..1475772
Molecular Weight (calculated) 34709.20 Da
IEP (calculated) 10.00
GRAVY (calculated) -0.15
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALQTLREW IGIQQFPPAT QSKLLEILGK YKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPTLVS RTRSGFTLNI IDTPGLIEGG
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)