AT5G03555.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : permease, cytosine/purines, uracil, thiamine, allantoin family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
permease, cytosine/purines, uracil, thiamine, allantoin family protein; FUNCTIONS IN: nucleobase transmembrane transporter activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Permease, cytosine/purines, uracil, thiamine, allantoin (InterPro:IPR001248); Has 4949 Blast hits to 4943 proteins in 959 species: Archae - 81; Bacteria - 2901; Metazoa - 0; Fungi - 592; Plants - 52; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:898354..900153 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65360.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.89 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.46 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 599 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSNCLSLSL HLNLHPHKHN RHSLSSLRSR TKAKLYQHVS FTDSSHKSSY TSCVSTFDIQ RKSSKHYELG KHSFSPILPG DNLVLSRSGV IRPRLSAMTG 101: SEINDHGYDE SQFDPSLTND DLKPTTPSQR TFSWLDMSSL WIGLVVGVPT YYLAGSLVDL GMAWWQGIAT VVTANLILLV PLVLTAQPGT LYGISFPVLA 201: RSSFGIRGAH IPTLLRALVG CGWYGIETWI GGEAIFLLLP GHIKKSALSH TLPWLGTSPL EFSCFIVFWL AQLCIVWRGM DGIRKLEKYS APILISLTSC 301: LLAWSYLKAG GFGHMLSLSS KLTSAQFWTL FFPSLTANIS FWATLALNIP DFSRFAKSQT DQIIGQVGLP VFMGLFTFVG VAVTSSTSII FGRVISNPIE 401: LLGQIGGLAT TLLAIVGISL ATLTTNIAAN VVAPANALVN LNPKFFTFGR GAFLTAVLGI VFQPWRLLKS SESFVYTWLI GYSALLGPIG GIILVDYYLI 501: KKMKLNIGDL YSLSPSGEYY FSKGYNVAAV VALVAGIIPV VPGFLHKISA LSKISNGFVV VYDNALFFSF IIAGFVYWII MSRLGRKQSS LSSSSHPLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)