AT5G03190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : conserved peptide upstream open reading frame 47 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
conserved peptide upstream open reading frame 47 (CPUORF47); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 272 Blast hits to 272 proteins in 24 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:758793..760148 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50911.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.84 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||
| Length | 451 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGIKILKLNI FRGSTNRHAL FRALIIASAL SVVPLLELTA KNHVFGDHGA VDLVDLGRFV IPGPKLFFHK LVQPFWGKIE TEKYPQVVIA DLVDELMGLK 101: LLHYDAKILC IGQGSDSAVS GFKEMGFSVV QGVPKHPLFS FFSRKHVNEL ELSGDKSFDF VLCGDVDHVA SPALLVLEME RVLKPGGTGA VLVSTNANRL 201: VKSVTSGLKQ SEIVRVNNLD KFTVIVFKRN VTETAYCIGK SQLPRDCKSV DTNRPYTEFM EPLLEQKPAD FPKSVAYLPK FLDLSLKKSL VYIDIGAAEH 301: MDANLTPNWF FPLYPLDSKA FNVYFVDHNT SVMLSYVKKP GVTFVYHPDL AENNSTGKKI TPLEQLEPFP EDERFDFLAW FEETAKYADF VVLKMNTNQV 401: EMKFLTVLLE TGVICYVDEL FLRCSNHKSD CINMLQTLRA RGVFVHQWWE D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)