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AT5G03030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G35795.1); Has 904 Blast hits to 904 proteins in 304 species: Archae - 0; Bacteria - 188; Metazoa - 208; Fungi - 196; Plants - 87; Viruses - 5; Other Eukaryotes - 220 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2214eggNOG:KOG0723EMBL:AL163002EMBL:AY085893
EMBL:BT025587EMBL:CP002688EnsemblPlants:AT5G03030EnsemblPlants:AT5G03030.1
entrez:831703Gene3D:1.10.287.110GeneID:831703Genevisible:Q9LYY2
GO:GO:0005743GO:GO:0016021Gramene:AT5G03030.1hmmpanther:PTHR12763
hmmpanther:PTHR12763:SF30HOGENOM:HOG000115841InParanoid:Q9LYY2InterPro:IPR001623
KEGG:ath:AT5G03030KO:K09539OMA:RVEMATPPaxDb:Q9LYY2
Pfam:Q9LYY2PhylomeDB:Q9LYY2PIR:T48324PRIDE:Q9LYY2
PRO:PR:Q9LYY2ProteinModelPortal:Q9LYY2Proteomes:UP000006548RefSeq:NP_195923.1
SMR:Q9LYY2STRING:3702.AT5G03030.1SUPFAM:SSF46565TAIR:AT5G03030
TMHMM:TMhelixUniGene:At.33328UniGene:At.33329UniProt:Q9LYY2
Coordinates (TAIR10) chr5:-:708479..709513
Molecular Weight (calculated) 12064.70 Da
IEP (calculated) 11.29
GRAVY (calculated) -0.16
Length 112 amino acids
Sequence (TAIR10)
(BLAST)
001: MATPMIAGAA VAAAAVAGRY GILAWQAFKA RPRVPRMRRF YEGGFQSSMT RREAALILGV RESVVADKVK EAHRRVMVAN HPDAGGSHYL ASKINEAKDM
101: MLGKSNNSGS AF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)