AT5G01710.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.573 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : methyltransferases | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:263709..265250 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 58291.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.38 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 513 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: METSMGKPSF LRNIMVRVLL FGVLIIVVRF AYVVTITGES CNRGDFCFFS LPENLNFVIS GAASGSSAID AIRSTSPGDD LYTTRDWIKS VQFYSSIFQD 101: LIADGYLSPE SKTLCVETAI GQEVHSLREI GVKNSVGISK KASRPLVVRG EGHAIPFEDN AFDFVFSGGD RLGKSLKQLE FADEITRTLK PEGFAVVHVG 201: ATDTYSFNSF LDLFNSCRLV KMRDIDGFDP SMPHIREFVI QKYSEIDGGG HHHRGGGDSG GKCWIPGYKR DLIRDAEPLI QEEPLKPWIT LKRNIKNIKY 301: VPSMVDIRFK SRYVYVDVGA RSYGSSIGSW FKKEYPKQNK TFDVFAIEAD KAFHEEYKIK KKVNLLPYAA WVRNETLSFE INHDPGKEVE AKAKGRGMGR 401: IQPVKKSDSS DLAGEVNLIQ GFDFADWLKK SVRERDFVVM KMDVEGTEFD LIPRLIKTGA ICLIDELFLE CHYNRWQRCC PGQRSQKYNK TYNQCLELFN 501: SLRQRGVLVH QWW |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)