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AT5G01710.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
extracellular 0.573
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methyltransferases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIUKeggNOG:ENOG410Y23WEMBL:AF083794EMBL:AL161946
EMBL:AY056223EMBL:AY142665EMBL:CP002688EnsemblPlants:AT5G01710
EnsemblPlants:AT5G01710.1entrez:831693Gene3D:3.40.50.150GeneID:831693
GO:GO:0008168Gramene:AT5G01710.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF885
HOGENOM:HOG000030521InterPro:IPR006342InterPro:IPR013216InterPro:IPR029063
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-
KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-
KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-
KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-
KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT5G01710OMA:CFFSLPE
Pfam:PF05050Pfam:PF08241PhylomeDB:Q9M005PIR:T48192
Proteomes:UP000006548RefSeq:NP_195791.1STRING:3702.AT5G01710.1SUPFAM:SSF53335
TAIR:AT5G01710TMHMM:TMhelixUniGene:At.25489UniProt:Q9M005
Coordinates (TAIR10) chr5:-:263709..265250
Molecular Weight (calculated) 58291.80 Da
IEP (calculated) 8.38
GRAVY (calculated) -0.30
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: METSMGKPSF LRNIMVRVLL FGVLIIVVRF AYVVTITGES CNRGDFCFFS LPENLNFVIS GAASGSSAID AIRSTSPGDD LYTTRDWIKS VQFYSSIFQD
101: LIADGYLSPE SKTLCVETAI GQEVHSLREI GVKNSVGISK KASRPLVVRG EGHAIPFEDN AFDFVFSGGD RLGKSLKQLE FADEITRTLK PEGFAVVHVG
201: ATDTYSFNSF LDLFNSCRLV KMRDIDGFDP SMPHIREFVI QKYSEIDGGG HHHRGGGDSG GKCWIPGYKR DLIRDAEPLI QEEPLKPWIT LKRNIKNIKY
301: VPSMVDIRFK SRYVYVDVGA RSYGSSIGSW FKKEYPKQNK TFDVFAIEAD KAFHEEYKIK KKVNLLPYAA WVRNETLSFE INHDPGKEVE AKAKGRGMGR
401: IQPVKKSDSS DLAGEVNLIQ GFDFADWLKK SVRERDFVVM KMDVEGTEFD LIPRLIKTGA ICLIDELFLE CHYNRWQRCC PGQRSQKYNK TYNQCLELFN
501: SLRQRGVLVH QWW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)