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AT4G39510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.985
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 96, subfamily A, polypeptide 12
Curator
Summary (TAIR10)
member of CYP96A
Computational
Description (TAIR10)
cytochrome P450, family 96, subfamily A, polypeptide 12 (CYP96A12); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 2 (TAIR:AT4G32170.1); Has 28368 Blast hits to 28289 proteins in 1454 species: Archae - 44; Bacteria - 2399; Metazoa - 10527; Fungi - 6386; Plants - 7973; Viruses - 3; Other Eukaryotes - 1036 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1500-MONOMEReggNOG:COG2124eggNOG:KOG0157EMBL:AL078620
EMBL:AL161595EMBL:AY058837EMBL:BT003025EMBL:CP002687
EnsemblPlants:AT4G39510EnsemblPlants:AT4G39510.1entrez:830105Gene3D:1.10.630.10
GeneID:830105GO:GO:0004497GO:GO:0005506GO:GO:0016021
GO:GO:0016705GO:GO:0020037Gramene:AT4G39510.1hmmpanther:PTHR24296
hmmpanther:PTHR24296:SF1HOGENOM:HOG000237580InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT4G39510OMA:HHANGESPfam:PF00067
PhylomeDB:Q9SVA7PIR:T09367PRINTS:PR00385PRINTS:PR00463
PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_195661.1scanprosite:PS00086
SMR:Q9SVA7STRING:3702.AT4G39510.1SUPFAM:SSF48264TAIR:AT4G39510
tair10-symbols:CYP96A12TMHMM:TMhelixUniGene:At.3444UniProt:Q9SVA7
Coordinates (TAIR10) chr4:-:18368945..18370471
Molecular Weight (calculated) 58424.70 Da
IEP (calculated) 7.96
GRAVY (calculated) -0.15
Length 508 amino acids
Sequence (TAIR10)
(BLAST)
001: MASVSLLDVA IAIICLFFFY YMYFKKPHGQ VFRNWPVIGM LPGFLMVLHR IYNFGVEALE MSHLTFLFKG PWFAEMDMLF TVDPANIHYI LSSNFSNYTK
101: GADFKEVFDV FGEMIFSSDS ELWKNQRKAA QFMLNHQGFQ KLSLSATRSK LYDGLVPLFN QCCEEEKVVD LQQVFQRFTF DTTFFIVTGF DPKSLSIEMP
201: EVEYAKALDD LGEGIFYRHI KPKFFWKLQN RFGLGQEKRM TEADATFDRV SAKYILAKRE EIRSQGIDHH ANGESEDLLT SHIKLDTTKY ELLNPSDDKF
301: LRDTILAFNL AGRDTTSSAL SWFFWLLSEN PQVVTKIRKE IIDKNISKDG RNGQENLDKL VYLHAALYES MRLYPPVAFQ RKSPIKPDVL PSGHKVEANS
401: VIIIFLFALG RMRAVWGEDA TEFKPERWVS ESGGLRHAPS FKFLSFNAGP RTCPGKQLAM TLMKTVVVEI LQNYDIDVIK GQKIEPEPGL MLHMKHGLRV
501: TITKRCSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)