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AT2G36870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : xyloglucan endotransglucosylase/hydrolase 32
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1); Has 1823 Blast hits to 1808 proteins in 256 species: Archae - 2; Bacteria - 180; Metazoa - 0; Fungi - 226; Plants - 1360; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G36870-MONOMERBioCyc:ARA:GQT-1891-MONOMERCAZy:GH16EC:2.4.1.207
eggNOG:ENOG410IJM7eggNOG:ENOG410YDGSEMBL:AC006922EMBL:AY045840
EMBL:AY088557EMBL:AY133846EMBL:CP002685EnsemblPlants:AT2G36870
EnsemblPlants:AT2G36870.1entrez:818259ExpressionAtlas:Q9SJL9Gene3D:2.60.120.200
GeneID:818259Genevisible:Q9SJL9GO:GO:0004553GO:GO:0005618
GO:GO:0010411GO:GO:0016762GO:GO:0016998GO:GO:0042546
GO:GO:0048046GO:GO:0071555hmmpanther:PTHR31062hmmpanther:PTHR31062:SF52
HOGENOM:HOG000236368InParanoid:Q9SJL9InterPro:IPR000757InterPro:IPR010713
InterPro:IPR013320InterPro:IPR016455iPTMnet:Q9SJL9OMA:QTHSMVY
PaxDb:Q9SJL9Pfam:PF00722Pfam:PF06955Pfam:Q9SJL9
Pfscan:PS51762PhylomeDB:Q9SJL9PIR:F84785PIRSF:PIRSF005604
PRIDE:Q9SJL9PRO:PR:Q9SJL9PROSITE:PS51762ProteinModelPortal:Q9SJL9
Proteomes:UP000006548RefSeq:NP_181224.1SMR:Q9SJL9STRING:3702.AT2G36870.1
SUPFAM:SSF49899TAIR:AT2G36870tair10-symbols:XTH32UniGene:At.14123
UniProt:Q9SJL9
Coordinates (TAIR10) chr2:-:15472869..15474630
Molecular Weight (calculated) 34483.90 Da
IEP (calculated) 9.84
GRAVY (calculated) -0.47
Length 299 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNSLISLLS IFHLLVLWGS SVNAYWPPSP GYWPSSKVGS LNFYKGFRNL WGPQHQRMDQ NALTIWLDRT SGSGFKSVKP FRSGYFGANI KLQPGYTAGV
101: ITSLYLSNNE AHPGFHDEVD IEFLGTTFGK PYTLQTNVYI RGSGDGKIIG REMKFRLWFD PTKDFHHYAI LWSPREIIFL VDDIPIRRYP KKSASTFPLR
201: PMWLYGSIWD ASSWATEDGK YKADYKYQPF TAKYTNFKAL GCTAYSSARC YPLSASPYRS GGLTRQQHQA MRWVQTHSMV YNYCKDYKRD HSLTPECWR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)