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AT2G24150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.621
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heptahelical protein 3
Curator
Summary (TAIR10)
heptahelical transmembrane protein HHP3
Computational
Description (TAIR10)
heptahelical protein 3 (HHP3); FUNCTIONS IN: receptor activity; INVOLVED IN: response to oxidative stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 1835 Blast hits to 1811 proteins in 386 species: Archae - 0; Bacteria - 338; Metazoa - 804; Fungi - 354; Plants - 193; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1272eggNOG:KOG0748EMBL:AC005967EMBL:AF325070
EMBL:AF370179EMBL:BT001975EMBL:CP002685EnsemblPlants:AT2G24150
EnsemblPlants:AT2G24150.1entrez:816949GeneID:816949Genevisible:Q9ZUH8
GO:GO:0004872GO:GO:0006979GO:GO:0009725GO:GO:0009744
GO:GO:0016021Gramene:AT2G24150.1hmmpanther:PTHR20855hmmpanther:PTHR20855:SF47
HOGENOM:HOG000197115InParanoid:Q9ZUH8InterPro:IPR004254KEGG:ath:AT2G24150
OMA:FRANLFLPANTHER:PTHR20855PaxDb:Q9ZUH8Pfam:PF03006
Pfam:Q9ZUH8PhylomeDB:Q9ZUH8PIR:B84633PRIDE:Q9ZUH8
PRO:PR:Q9ZUH8ProteinModelPortal:Q9ZUH8Proteomes:UP000006548RefSeq:NP_565564.1
SMR:Q9ZUH8STRING:3702.AT2G24150.1TAIR:AT2G24150tair10-symbols:HHP3
TMHMM:TMhelixUniGene:At.13400UniProt:Q9ZUH8
Coordinates (TAIR10) chr2:-:10265632..10267345
Molecular Weight (calculated) 38855.50 Da
IEP (calculated) 8.43
GRAVY (calculated) 0.39
Length 344 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRRRSAKKS PAMVTVTDWK GLDCGEETRI VRRLMKFEDL PEYLKDNEFI HNHYRCQWSL KDTFLSAFSW HNETLNIWTH LIGFGIFLWM TVVSCLETTE
101: ISLAGVFNGM AGVRICLSSN QTLLHDSNVT HHISCLTSQG EAIPKWPWLV YLVGAMGCLI CSSVSHLLAC HSKRFNVFFW RLDYAGISLM IVASFFAPIY
201: YAFSCHPNFR LLYLSSISIL GLLAIITLLS PALSTPRFRP FRANLFLAMG SSAVIPATHV LCLYWDHPNV FIALGYEIAT ALSYFVGATF YVSRVPERWK
301: PGAFDMAGHS HQIFHVFVVM GALAHCVTTL LIIDFSRASP SCGF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)