AT2G24150.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 0.621 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : heptahelical protein 3 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
heptahelical transmembrane protein HHP3 | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
heptahelical protein 3 (HHP3); FUNCTIONS IN: receptor activity; INVOLVED IN: response to oxidative stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 1835 Blast hits to 1811 proteins in 386 species: Archae - 0; Bacteria - 338; Metazoa - 804; Fungi - 354; Plants - 193; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:10265632..10267345 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 38855.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.43 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.39 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 344 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKRRRSAKKS PAMVTVTDWK GLDCGEETRI VRRLMKFEDL PEYLKDNEFI HNHYRCQWSL KDTFLSAFSW HNETLNIWTH LIGFGIFLWM TVVSCLETTE 101: ISLAGVFNGM AGVRICLSSN QTLLHDSNVT HHISCLTSQG EAIPKWPWLV YLVGAMGCLI CSSVSHLLAC HSKRFNVFFW RLDYAGISLM IVASFFAPIY 201: YAFSCHPNFR LLYLSSISIL GLLAIITLLS PALSTPRFRP FRANLFLAMG SSAVIPATHV LCLYWDHPNV FIALGYEIAT ALSYFVGATF YVSRVPERWK 301: PGAFDMAGHS HQIFHVFVVM GALAHCVTTL LIIDFSRASP SCGF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)