suba logo
AT1G13080.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 0.843
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 2
Curator
Summary (TAIR10)
cytochrome P450 monooxygenase
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 2 (CYP71B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone, heat acclimation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 20 (TAIR:AT3G26180.1); Has 33312 Blast hits to 33067 proteins in 1707 species: Archae - 47; Bacteria - 3450; Metazoa - 12035; Fungi - 6950; Plants - 9630; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13080-MONOMERBioCyc:ARA:GQT-1521-MONOMEREC:1.14.-.-eggNOG:COG2124
eggNOG:KOG0156EMBL:AC007357EMBL:AY064051EMBL:BT003811
EMBL:CP002684EMBL:D78605EMBL:Z18072EnsemblPlants:AT1G13080
EnsemblPlants:AT1G13080.1entrez:837865Gene3D:1.10.630.10GeneID:837865
Genevisible:O65788GO:GO:0005506GO:GO:0010286GO:GO:0016020
GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550
GO:GO:0098542hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144HOGENOM:HOG000218629
InParanoid:O65788InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT1G13080OMA:MNLLYYFPaxDb:O65788Pfam:O65788
Pfam:PF00067PhylomeDB:O65788PIR:H86264PIR:T52173
PRIDE:O65788PRINTS:PR00385PRINTS:PR00463PRO:PR:O65788
PROSITE:PS00086ProteinModelPortal:O65788Proteomes:UP000006548RefSeq:NP_172767.1
RefSeq:NP_849653.1scanprosite:PS00086SMR:O65788STRING:3702.AT1G13080.1
SUPFAM:SSF48264TAIR:AT1G13080tair10-symbols:CYP71B2TMHMM:TMhelix
UniGene:At.337UniProt:O65788
Coordinates (TAIR10) chr1:+:4459212..4460807
Molecular Weight (calculated) 57143.40 Da
IEP (calculated) 7.60
GRAVY (calculated) -0.11
Length 502 amino acids
Sequence (TAIR10)
(BLAST)
001: MTILLCFFLV SLLTIVSSIF LKQNKTSKFN LPPSPSSLPI IGNLHHLAGL PHRCFHKLSI KYGPLVFLRL GSVPVVVISS SEAAEAVLKT NDLECCSRPK
101: TVGSGKLSYG FKDITFAPYG EYWREVRKLA VIELFSSKKV QSFRYIREEE VDFVVKKVSE SALKQSPVDL SKTFFSLTAS IICRVALGQN FNESGFVIDQ
201: DRIEELVTES AEALGTFTFS DFFPGGLGRF VDWLFQRHKK INKVFKELDA FYQHVIDDHL KPEGRKNQDI VTLILDMIDK QEDSDSFKLN MDNLKAIVMD
301: VFLAGIDTSA VTMIWAMTEL IRNPRVMKKA QESIRTTLGL KKERITEEDL GKVEYLNHIL KETFRLHPAL PFVVPRETMS HIKIQGYDIP PKTQIQLNVW
401: TIGRDPKRWN DPEEFNPERF ANSSVDFRGQ HFDLLPFGSG RRICPGMPMA IASVELALMN LLYYFDWSMP DGTKGEDIDM EEAGNISIVK KIPLQLVPVQ
501: RY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)