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AT4G37400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.974
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 81, subfamily F, polypeptide 3
Curator
Summary (TAIR10)
member of CYP81F
Computational
Description (TAIR10)
cytochrome P450, family 81, subfamily F, polypeptide 3 (CYP81F3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, leaf whorl, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 4 (TAIR:AT4G37410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37400-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AK227603EMBL:AL035601EMBL:AL161591EMBL:AY087977
EMBL:BT010585EMBL:CP002687EnsemblPlants:AT4G37400EnsemblPlants:AT4G37400.1
entrez:829894Gene3D:1.10.630.10GeneID:829894GO:GO:0004497
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709
GO:GO:0020037GO:GO:0042343GO:GO:0044550GO:GO:0098542
Gramene:AT4G37400.1gramene_pathway:2.1.1.-gramene_pathway:PWY-601gramene_pathway:PWYQT-4477
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF171HOGENOM:HOG000218627InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT4G37400KO:K00517
OMA:MFYYVIVPaxDb:Q0WTF4Pfam:PF00067PhylomeDB:Q0WTF4
PIR:T04734PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086
ProteinModelPortal:Q0WTF4Proteomes:UP000006548RefSeq:NP_568025.1scanprosite:PS00086
SMR:Q0WTF4STRING:3702.AT4G37400.1SUPFAM:SSF48264TAIR:AT4G37400
tair10-symbols:CYP81F3TMHMM:TMhelixUniGene:At.27829UniGene:At.72714
UniProt:Q0WTF4
Coordinates (TAIR10) chr4:+:17584096..17586197
Molecular Weight (calculated) 56639.90 Da
IEP (calculated) 8.52
GRAVY (calculated) -0.27
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MFYYVIVLPL ALFLLAYKLF FTSKTKRFNL PPSPPYSLPI LGHHNLLKPP VHRLFHRLSK THGPIFSLQF GSRRAVVISS SSLATQCFTG QNDIILSNRP
101: CFLTAKYVAY NYTTVGTAPY GDHWRNLRRI CSLEILSSNR LTNFLHIRKD EIHRMLTRLS RDVNKEIELE PLLSDLTFNN IVRMVTGKRY YGDEVHNEEE
201: ANVFKKLVAD INDCSGARHP GDYLPFMKMF GGSFEKKVKA LAEAMDEILQ RLLEECKRDK DGNTMVNHLL SLQQNEPEYY TDVTIKGLML GMMIAGTDTS
301: AVTLEWAMSS LLNHPEALEK AKLEIDEKIG QERLIDEPDI ANLPYLQNIV SETFRLYPAA PLLVPRSPTE DIKVGGYDVP RGTMVMVNAW AIHRDPELWN
401: EPEKFKPERF NGGEGGGRGE DVHKLMPFGN GRRSCPGAGL GQKIVTLALG SLIQCFDWQK VNGEAIDMTE TPGMAMRKKI PLSALCQSRP IMSKLQAHLK
501: G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)