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AT4G32605.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23750852 (2013): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:18385124 (2008): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial glycoprotein family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial glycoprotein family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 330 Blast hits to 330 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 99; Plants - 196; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111MS5eggNOG:KOG2536EMBL:AK316920EMBL:AY128410
EMBL:BT000071EMBL:CP002687EnsemblPlants:AT4G32605EnsemblPlants:AT4G32605.1
entrez:5008179Gene3D:3.10.280.10GeneID:5008179GO:GO:0005739
GO:GO:0005759Gramene:AT4G32605.1hmmpanther:PTHR31365hmmpanther:PTHR31365:SF2
HOGENOM:HOG000238320InterPro:IPR003428KEGG:ath:AT4G32605OMA:HVLRRTH
Pfam:PF02330PhylomeDB:Q8L7K1Proteomes:UP000006548RefSeq:NP_001078481.1
SMR:Q8L7K1STRING:3702.AT4G32605.1SUPFAM:SSF54529TAIR:AT4G32605
UniGene:At.31653UniProt:Q8L7K1
Coordinates (TAIR10) chr4:-:15726429..15727864
Molecular Weight (calculated) 25172.00 Da
IEP (calculated) 6.42
GRAVY (calculated) -0.34
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MWRRVIGNVA VRHQLQRALS SKAGGSGKSA NVSAAVDSML LRSLKEHYLE VSKMTPPPKV SPPSPFEIVK GSLEGSTGAV LKKSVGNEEI NLFVMRLAHG
101: GDEEDDGGIN QLFLHVAVSK PNQPDSLHFL CGLYPDALGI HSVSMRPKLE ALEMSDDPTQ YTGPSFEELD EKMRDVFHGF LEERGVNESL FPFLQAWLYV
201: KDHRNLLRWF KSVGTFVHEN PSAENTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)