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AT4G32210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : succinate dehydrogenase 3-2
Curator
Summary (TAIR10)
Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-1.
Computational
Description (TAIR10)
succinate dehydrogenase 3-2 (SDH3-2); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-1 (TAIR:AT5G09600.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G32210-MONOMERBioCyc:MetaCyc:AT4G32210-MONOMEReggNOG:COG2009eggNOG:KOG0102
eggNOG:KOG0449EMBL:AL021811EMBL:AL161580EMBL:AY070732
EMBL:BK000035EMBL:CP002687EnsemblPlants:AT4G32210EnsemblPlants:AT4G32210.1
EnsemblPlants:AT5G09600.1EnsemblPlants:AT5G09600.3entrez:3770570entrez:830819
ExpressionAtlas:P0DKI1GeneID:3770570GeneID:830819Genevisible:P0DKI1
GO:GO:0005743GO:GO:0006099GO:GO:0016021GO:GO:0016627
GO:GO:0045273GO:GO:0046872Gramene:AT4G32210.1Gramene:AT5G09600.1
Gramene:AT5G09600.3hmmpanther:PTHR10978hmmpanther:PTHR10978:SF5HOGENOM:HOG000015220
InterPro:IPR000701KEGG:ath:AT4G32210KO:K00236PaxDb:P0DKI1
Pfam:P0DKI0Pfam:P0DKI1Pfam:PF01127PhylomeDB:P0DKI1
PIR:T05407PRO:PR:P0DKI1ProteinModelPortal:P0DKI1Proteomes:UP000006548
RefSeq:NP_001190268.1RefSeq:NP_194948.2RefSeq:NP_196522.1SMR:P0DKI1
STRING:3702.AT5G09600.1SUPFAM:SSF81343TAIR:AT4G32210tair10-symbols:SDH3-2
TMHMM:TMhelixUniGene:At.26674UniGene:At.48927UniGene:At.68794
UniPathway:UPA00223UniProt:P0DKI0UniProt:P0DKI1
Coordinates (TAIR10) chr4:-:15556732..15558041
Molecular Weight (calculated) 23455.30 Da
IEP (calculated) 10.38
GRAVY (calculated) -0.03
Length 213 amino acids
Sequence (TAIR10)
(BLAST)
001: MAATALFRSI RRRDVVSAPL SVYKSLAGNA QPSWGSSYIG QNYASFSRAF GSKPVVNDIL GTGLGTNNAI REEREKSKST EAAIVGAQLT RSFRALDVGT
101: SKRLFSTISG DIKTTQEEPK IKSFRPLSPH LSVYQPQMNS MLSIFNRISG VYLTGVTFAG YLLYLKMGMI CLTYPSFYQV LYHTQQQLPV ITSVTALAAI
201: YHTIKSTHSL LTH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)