AT4G31890.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G25130.1); Has 1876 Blast hits to 1673 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 369; Fungi - 233; Plants - 1143; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15427290..15429049 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56232.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.43 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||
| Length | 518 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKCHRNNIG SLILDRAPST SSSSTSGYHF RLWSTFSRST FRRKIVDAVS CGGSSRYRHE LREEDDEGSY VTVTAKSTVA SSKDAKANTI GAALNGVAFE 101: ETSKKSEKLC DLLNLAEVEA DVETMKKEEA LEVLKRVVRE LQSAAAARED NDDGGDCRKK ITAASEVRLL AKEDSEARVT LAMLGAIPPL VSMIDDSRIV 201: DAQIASLYAL LNLGIGNDAN KAAIVKAGAV HKMLKLIESP NTPDQEIAEA VVANFLGLSA LDSNKPIIGS SGAIIFLVKT LQNLDETSSS QAREDALRAL 301: YNLSIYQPNV SFILETDLIT YLLNTLGDME VSERILAILS NLVAVPEGRK AIGLVCDAFP VLVDVLNWTD SPGCQEKATY ILMLMAHKGY GDRQVMIEAG 401: IESALLELTL LGSALAQKRA SRILECLRVD KGKQVLDSTG SCGALSAPIY GTRDNGLDHE ENDLMMSEER KAVKQLVQQS LQSNMKRIVK RANLPQDFVP 501: SEHFKSLSLS STSKSLPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)